Cluster: ShaoY_2019_ERR3405931_bin.18_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405931_bin.18
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405931_bin.18_k141_6275 | ShaoY_2019_ERR3405931_bin.18_k141_6275_330 | 332602 | 335712 | - | GH106 |
| TC | ShaoY_2019_ERR3405931_bin.18_k141_6275 | ShaoY_2019_ERR3405931_bin.18_k141_6275_331 | 335861 | 338086 | - | 9.B.74.1.1 |
| TC | ShaoY_2019_ERR3405931_bin.18_k141_6275 | ShaoY_2019_ERR3405931_bin.18_k141_6275_332 | 338089 | 340731 | - | 9.B.74.1.1 |
| peptidase | ShaoY_2019_ERR3405931_bin.18_k141_6275 | ShaoY_2019_ERR3405931_bin.18_k141_6275_333 | 340947 | 342251 | - | C40.UPW |
| pfam | ShaoY_2019_ERR3405931_bin.18_k141_6275 | ShaoY_2019_ERR3405931_bin.18_k141_6275_334 | 342461 | 346210 | - | Big_3_5 | YDG |
| TC | ShaoY_2019_ERR3405931_bin.18_k141_6275 | ShaoY_2019_ERR3405931_bin.18_k141_6275_335 | 346651 | 347991 | - | 2.A.40.1.1 |
| TC | ShaoY_2019_ERR3405931_bin.18_k141_6275 | ShaoY_2019_ERR3405931_bin.18_k141_6275_336 | 348169 | 349959 | - | 3.A.1.120.6 |
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_6275_330
Type: CAZyme
Location: 332602 - 335712 (-)
Type: CAZyme
Location: 332602 - 335712 (-)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_6275_331
Type: TC
Location: 335861 - 338086 (-)
Type: TC
Location: 335861 - 338086 (-)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_6275_332
Type: TC
Location: 338089 - 340731 (-)
Type: TC
Location: 338089 - 340731 (-)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_6275_333
Type: peptidase
Location: 340947 - 342251 (-)
Type: peptidase
Location: 340947 - 342251 (-)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_6275_334
Type: pfam
Location: 342461 - 346210 (-)
Type: pfam
Location: 342461 - 346210 (-)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_6275_335
Type: TC
Location: 346651 - 347991 (-)
Type: TC
Location: 346651 - 347991 (-)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_6275_336
Type: TC
Location: 348169 - 349959 (-)
Type: TC
Location: 348169 - 349959 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caproicibacterium
Species
Caproicibacterium amylolyticum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.