Cluster: ShaoY_2019_ERR3405931_bin.18_CGC45
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405931_bin.18
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405931_bin.18_k141_29049 | ShaoY_2019_ERR3405931_bin.18_k141_29049_284 | 282918 | 284744 | - | 2.A.16.2.2 |
| TC | ShaoY_2019_ERR3405931_bin.18_k141_29049 | ShaoY_2019_ERR3405931_bin.18_k141_29049_285 | 284818 | 286014 | - | 9.B.141.1.1 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405931_bin.18_k141_29049 | ShaoY_2019_ERR3405931_bin.18_k141_29049_286 | 286318 | 286590 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | ShaoY_2019_ERR3405931_bin.18_k141_29049 | ShaoY_2019_ERR3405931_bin.18_k141_29049_287 | 286851 | 287294 | + | DUF212 |
| CAZyme | ShaoY_2019_ERR3405931_bin.18_k141_29049 | ShaoY_2019_ERR3405931_bin.18_k141_29049_288 | 287460 | 289223 | + | GH35 |
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_29049_284
Type: TC
Location: 282918 - 284744 (-)
Type: TC
Location: 282918 - 284744 (-)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_29049_285
Type: TC
Location: 284818 - 286014 (-)
Type: TC
Location: 284818 - 286014 (-)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_29049_286
Type:
Location: 286318 - 286590 (+)
Type:
Location: 286318 - 286590 (+)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_29049_287
Type: pfam
Location: 286851 - 287294 (+)
Type: pfam
Location: 286851 - 287294 (+)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_29049_288
Type: CAZyme
Location: 287460 - 289223 (+)
Type: CAZyme
Location: 287460 - 289223 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caproicibacterium
Species
Caproicibacterium amylolyticum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.