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Cluster: ShaoY_2019_ERR3405931_bin.18_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3405931_bin.18_k141_29049 ShaoY_2019_ERR3405931_bin.18_k141_29049_265 267071 268546 + 2.A.40.7.6
pfam ShaoY_2019_ERR3405931_bin.18_k141_29049 ShaoY_2019_ERR3405931_bin.18_k141_29049_266 268614 270518 - DUF6020
CAZyme ShaoY_2019_ERR3405931_bin.18_k141_29049 ShaoY_2019_ERR3405931_bin.18_k141_29049_267 270502 271443 - GT2
pfam ShaoY_2019_ERR3405931_bin.18_k141_29049 ShaoY_2019_ERR3405931_bin.18_k141_29049_268 271810 272526 + Methyltrans_RNA | PUA_4
pfam ShaoY_2019_ERR3405931_bin.18_k141_29049 ShaoY_2019_ERR3405931_bin.18_k141_29049_269 272540 273244 + adh_short | Epimerase | KR | adh_short_C2
TC ShaoY_2019_ERR3405931_bin.18_k141_29049 ShaoY_2019_ERR3405931_bin.18_k141_29049_270 273454 275121 + 3.A.1.5.22
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_29049_265
Type: TC
Location: 267071 - 268546 (+)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_29049_266
Type: pfam
Location: 268614 - 270518 (-)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_29049_267
Type: CAZyme
Location: 270502 - 271443 (-)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_29049_268
Type: pfam
Location: 271810 - 272526 (+)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_29049_269
Type: pfam
Location: 272540 - 273244 (+)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_29049_270
Type: TC
Location: 273454 - 275121 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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