Cluster: ShaoY_2019_ERR3405931_bin.18_CGC38
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405931_bin.18
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405931_bin.18_k141_26609 | ShaoY_2019_ERR3405931_bin.18_k141_26609_110 | 99043 | 101163 | + | 1.B.52.2.2 |
| CAZyme | ShaoY_2019_ERR3405931_bin.18_k141_26609 | ShaoY_2019_ERR3405931_bin.18_k141_26609_111 | 101256 | 103235 | - | GH31_4 |
| TF | ShaoY_2019_ERR3405931_bin.18_k141_26609 | ShaoY_2019_ERR3405931_bin.18_k141_26609_112 | 103356 | 104243 | + | HTH_AraC | HTH_AraC |
| STP | ShaoY_2019_ERR3405931_bin.18_k141_26609 | ShaoY_2019_ERR3405931_bin.18_k141_26609_113 | 104527 | 105333 | - | PfkB |
| TC | ShaoY_2019_ERR3405931_bin.18_k141_26609 | ShaoY_2019_ERR3405931_bin.18_k141_26609_114 | 106094 | 106633 | + | 3.A.1.26.7 |
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_26609_110
Type: TC
Location: 99043 - 101163 (+)
Type: TC
Location: 99043 - 101163 (+)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_26609_111
Type: CAZyme
Location: 101256 - 103235 (-)
Type: CAZyme
Location: 101256 - 103235 (-)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_26609_112
Type: TF
Location: 103356 - 104243 (+)
Type: TF
Location: 103356 - 104243 (+)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_26609_113
Type: STP
Location: 104527 - 105333 (-)
Type: STP
Location: 104527 - 105333 (-)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_26609_114
Type: TC
Location: 106094 - 106633 (+)
Type: TC
Location: 106094 - 106633 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caproicibacterium
Species
Caproicibacterium amylolyticum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.