Cluster: ShaoY_2019_ERR3405931_bin.18_CGC32
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405931_bin.18
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405931_bin.18_k141_23762 | ShaoY_2019_ERR3405931_bin.18_k141_23762_558 | 599523 | 601709 | + | GH36 |
| TC | ShaoY_2019_ERR3405931_bin.18_k141_23762 | ShaoY_2019_ERR3405931_bin.18_k141_23762_559 | 601792 | 603096 | + | 3.A.1.1.28 |
| TC | ShaoY_2019_ERR3405931_bin.18_k141_23762 | ShaoY_2019_ERR3405931_bin.18_k141_23762_560 | 603053 | 604006 | + | 3.A.1.1.28 |
| TC | ShaoY_2019_ERR3405931_bin.18_k141_23762 | ShaoY_2019_ERR3405931_bin.18_k141_23762_561 | 604003 | 604857 | + | 3.A.1.1.28 |
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_23762_558
Type: CAZyme
Location: 599523 - 601709 (+)
Type: CAZyme
Location: 599523 - 601709 (+)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_23762_559
Type: TC
Location: 601792 - 603096 (+)
Type: TC
Location: 601792 - 603096 (+)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_23762_560
Type: TC
Location: 603053 - 604006 (+)
Type: TC
Location: 603053 - 604006 (+)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_23762_561
Type: TC
Location: 604003 - 604857 (+)
Type: TC
Location: 604003 - 604857 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caproicibacterium
Species
Caproicibacterium amylolyticum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.