Cluster: ShaoY_2019_ERR3405931_bin.18_CGC31
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405931_bin.18
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405931_bin.18_k141_23762 | ShaoY_2019_ERR3405931_bin.18_k141_23762_529 | 568659 | 569666 | + | 8.A.5.1.3 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405931_bin.18_k141_23762 | ShaoY_2019_ERR3405931_bin.18_k141_23762_530 | 569952 | 571523 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | ShaoY_2019_ERR3405931_bin.18_k141_23762 | ShaoY_2019_ERR3405931_bin.18_k141_23762_531 | 571516 | 572223 | - | 3.A.1.147.2 |
| CAZyme | ShaoY_2019_ERR3405931_bin.18_k141_23762 | ShaoY_2019_ERR3405931_bin.18_k141_23762_532 | 572440 | 574104 | - | GH13_31 |
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_23762_529
Type: TC
Location: 568659 - 569666 (+)
Type: TC
Location: 568659 - 569666 (+)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_23762_530
Type:
Location: 569952 - 571523 (-)
Type:
Location: 569952 - 571523 (-)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_23762_531
Type: TC
Location: 571516 - 572223 (-)
Type: TC
Location: 571516 - 572223 (-)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_23762_532
Type: CAZyme
Location: 572440 - 574104 (-)
Type: CAZyme
Location: 572440 - 574104 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caproicibacterium
Species
Caproicibacterium amylolyticum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.