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Cluster: ShaoY_2019_ERR3405931_bin.18_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3405931_bin.18_k141_23762 ShaoY_2019_ERR3405931_bin.18_k141_23762_230 253681 255126 + 2.A.6.4.2
TC ShaoY_2019_ERR3405931_bin.18_k141_23762 ShaoY_2019_ERR3405931_bin.18_k141_23762_231 255113 256105 + 2.A.6.4.2
sulfatase ShaoY_2019_ERR3405931_bin.18_k141_23762 ShaoY_2019_ERR3405931_bin.18_k141_23762_232 256226 257284 - S1_22
pfam ShaoY_2019_ERR3405931_bin.18_k141_23762 ShaoY_2019_ERR3405931_bin.18_k141_23762_233 257315 258271 - ROK
TC ShaoY_2019_ERR3405931_bin.18_k141_23762 ShaoY_2019_ERR3405931_bin.18_k141_23762_234 258502 259179 + 9.B.18.1.2
CAZyme ShaoY_2019_ERR3405931_bin.18_k141_23762 ShaoY_2019_ERR3405931_bin.18_k141_23762_235 259237 260040 + CE4
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_23762_230
Type: TC
Location: 253681 - 255126 (+)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_23762_231
Type: TC
Location: 255113 - 256105 (+)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_23762_232
Type: sulfatase
Location: 256226 - 257284 (-)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_23762_233
Type: pfam
Location: 257315 - 258271 (-)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_23762_234
Type: TC
Location: 258502 - 259179 (+)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_23762_235
Type: CAZyme
Location: 259237 - 260040 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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