Cluster: ShaoY_2019_ERR3405931_bin.18_CGC24
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: ShaoY_2019_ERR3405931_bin.18
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405931_bin.18_k141_23762 | ShaoY_2019_ERR3405931_bin.18_k141_23762_131 | 146826 | 147287 | - | 1.E.43.1.1 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405931_bin.18_k141_23762 | ShaoY_2019_ERR3405931_bin.18_k141_23762_132 | 147345 | 148109 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | ShaoY_2019_ERR3405931_bin.18_k141_23762 | ShaoY_2019_ERR3405931_bin.18_k141_23762_133 | 148200 | 149195 | + | GT4 |
| pfam | ShaoY_2019_ERR3405931_bin.18_k141_23762 | ShaoY_2019_ERR3405931_bin.18_k141_23762_134 | 149349 | 150419 | + | Epimerase_2 |
| CAZyme | ShaoY_2019_ERR3405931_bin.18_k141_23762 | ShaoY_2019_ERR3405931_bin.18_k141_23762_135 | 150432 | 152090 | + | GT4 |
| CAZyme | ShaoY_2019_ERR3405931_bin.18_k141_23762 | ShaoY_2019_ERR3405931_bin.18_k141_23762_136 | 152095 | 152751 | - | GT32 |
| CAZyme | ShaoY_2019_ERR3405931_bin.18_k141_23762 | ShaoY_2019_ERR3405931_bin.18_k141_23762_137 | 152887 | 153927 | + | GT113 |
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_23762_131
Type: TC
Location: 146826 - 147287 (-)
Type: TC
Location: 146826 - 147287 (-)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_23762_132
Type:
Location: 147345 - 148109 (-)
Type:
Location: 147345 - 148109 (-)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_23762_133
Type: CAZyme
Location: 148200 - 149195 (+)
Type: CAZyme
Location: 148200 - 149195 (+)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_23762_134
Type: pfam
Location: 149349 - 150419 (+)
Type: pfam
Location: 149349 - 150419 (+)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_23762_135
Type: CAZyme
Location: 150432 - 152090 (+)
Type: CAZyme
Location: 150432 - 152090 (+)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_23762_136
Type: CAZyme
Location: 152095 - 152751 (-)
Type: CAZyme
Location: 152095 - 152751 (-)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_23762_137
Type: CAZyme
Location: 152887 - 153927 (+)
Type: CAZyme
Location: 152887 - 153927 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caproicibacterium
Species
Caproicibacterium amylolyticum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.