Cluster: ShaoY_2019_ERR3405931_bin.18_CGC20
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405931_bin.18
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405931_bin.18_k141_12188 | ShaoY_2019_ERR3405931_bin.18_k141_12188_152 | 161306 | 162610 | + | 1.B.52.2.2 |
| pfam | ShaoY_2019_ERR3405931_bin.18_k141_12188 | ShaoY_2019_ERR3405931_bin.18_k141_12188_153 | 162649 | 163419 | - | PilZ |
| pfam | ShaoY_2019_ERR3405931_bin.18_k141_12188 | ShaoY_2019_ERR3405931_bin.18_k141_12188_154 | 163790 | 165415 | + | Flagellin_N | Flagellin_C |
| CAZyme | ShaoY_2019_ERR3405931_bin.18_k141_12188 | ShaoY_2019_ERR3405931_bin.18_k141_12188_155 | 165582 | 167768 | + | GT2 |
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_12188_152
Type: TC
Location: 161306 - 162610 (+)
Type: TC
Location: 161306 - 162610 (+)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_12188_153
Type: pfam
Location: 162649 - 163419 (-)
Type: pfam
Location: 162649 - 163419 (-)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_12188_154
Type: pfam
Location: 163790 - 165415 (+)
Type: pfam
Location: 163790 - 165415 (+)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_12188_155
Type: CAZyme
Location: 165582 - 167768 (+)
Type: CAZyme
Location: 165582 - 167768 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caproicibacterium
Species
Caproicibacterium amylolyticum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.