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Cluster: ShaoY_2019_ERR3405931_bin.18_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3405931_bin.18_k141_10594 ShaoY_2019_ERR3405931_bin.18_k141_10594_23 25340 26185 + 9.A.8.1.5
CAZyme ShaoY_2019_ERR3405931_bin.18_k141_10594 ShaoY_2019_ERR3405931_bin.18_k141_10594_24 26324 27631 + GH13_20
TC ShaoY_2019_ERR3405931_bin.18_k141_10594 ShaoY_2019_ERR3405931_bin.18_k141_10594_25 27750 28697 - 3.A.1.15.13
TC ShaoY_2019_ERR3405931_bin.18_k141_10594 ShaoY_2019_ERR3405931_bin.18_k141_10594_26 28823 29491 + 3.A.1.15.11
TC ShaoY_2019_ERR3405931_bin.18_k141_10594 ShaoY_2019_ERR3405931_bin.18_k141_10594_27 29492 30319 + 3.A.1.15.3
TC ShaoY_2019_ERR3405931_bin.18_k141_10594 ShaoY_2019_ERR3405931_bin.18_k141_10594_28 30379 31302 + 9.B.10.1.1
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_10594_23
Type: TC
Location: 25340 - 26185 (+)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_10594_24
Type: CAZyme
Location: 26324 - 27631 (+)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_10594_25
Type: TC
Location: 27750 - 28697 (-)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_10594_26
Type: TC
Location: 28823 - 29491 (+)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_10594_27
Type: TC
Location: 29492 - 30319 (+)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_10594_28
Type: TC
Location: 30379 - 31302 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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