Cluster: ShaoY_2019_ERR3405931_bin.18_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405931_bin.18
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405931_bin.18_k141_6275 | ShaoY_2019_ERR3405931_bin.18_k141_6275_505 | 546788 | 548137 | - | GH1 |
| STP | ShaoY_2019_ERR3405931_bin.18_k141_6275 | ShaoY_2019_ERR3405931_bin.18_k141_6275_506 | 548309 | 549169 | + | Peripla_BP_3 |
| TC | ShaoY_2019_ERR3405931_bin.18_k141_6275 | ShaoY_2019_ERR3405931_bin.18_k141_6275_507 | 549211 | 550014 | - | 9.B.34.1.2 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405931_bin.18_k141_6275 | ShaoY_2019_ERR3405931_bin.18_k141_6275_508 | 550542 | 551834 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405931_bin.18_k141_6275 | ShaoY_2019_ERR3405931_bin.18_k141_6275_509 | 552138 | 552548 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | ShaoY_2019_ERR3405931_bin.18_k141_6275 | ShaoY_2019_ERR3405931_bin.18_k141_6275_510 | 552612 | 554453 | - | 1.B.52.2.1 |
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_6275_505
Type: CAZyme
Location: 546788 - 548137 (-)
Type: CAZyme
Location: 546788 - 548137 (-)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_6275_506
Type: STP
Location: 548309 - 549169 (+)
Type: STP
Location: 548309 - 549169 (+)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_6275_507
Type: TC
Location: 549211 - 550014 (-)
Type: TC
Location: 549211 - 550014 (-)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_6275_508
Type:
Location: 550542 - 551834 (-)
Type:
Location: 550542 - 551834 (-)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_6275_509
Type:
Location: 552138 - 552548 (+)
Type:
Location: 552138 - 552548 (+)
Gene ID: ShaoY_2019_ERR3405931_bin.18_k141_6275_510
Type: TC
Location: 552612 - 554453 (-)
Type: TC
Location: 552612 - 554453 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caproicibacterium
Species
Caproicibacterium amylolyticum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.