Cluster: ShaoY_2019_ERR3405922_bin.6_CGC37
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3405922_bin.6
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405922_bin.6_k141_24007 | ShaoY_2019_ERR3405922_bin.6_k141_24007_27 | 26610 | 28610 | + | 4.A.1.2.13 |
| CAZyme | ShaoY_2019_ERR3405922_bin.6_k141_24007 | ShaoY_2019_ERR3405922_bin.6_k141_24007_28 | 28646 | 30313 | + | GH13_29 |
| CAZyme | ShaoY_2019_ERR3405922_bin.6_k141_24007 | ShaoY_2019_ERR3405922_bin.6_k141_24007_29 | 30912 | 31841 | - | GT2 |
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_24007_27
Type: TC
Location: 26610 - 28610 (+)
Type: TC
Location: 26610 - 28610 (+)
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_24007_28
Type: CAZyme
Location: 28646 - 30313 (+)
Type: CAZyme
Location: 28646 - 30313 (+)
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_24007_29
Type: CAZyme
Location: 30912 - 31841 (-)
Type: CAZyme
Location: 30912 - 31841 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter faecipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.