Cluster: ShaoY_2019_ERR3405922_bin.6_CGC28
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405922_bin.6
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405922_bin.6_k141_18469 | ShaoY_2019_ERR3405922_bin.6_k141_18469_3 | 1435 | 3828 | - | GH31_15 |
| TC | ShaoY_2019_ERR3405922_bin.6_k141_18469 | ShaoY_2019_ERR3405922_bin.6_k141_18469_4 | 3912 | 4733 | - | 3.A.1.1.39 |
| TC | ShaoY_2019_ERR3405922_bin.6_k141_18469 | ShaoY_2019_ERR3405922_bin.6_k141_18469_5 | 4746 | 5624 | - | 3.A.1.1.20 |
| TC | ShaoY_2019_ERR3405922_bin.6_k141_18469 | ShaoY_2019_ERR3405922_bin.6_k141_18469_6 | 5639 | 7021 | - | 3.A.1.1.41 |
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_18469_3
Type: CAZyme
Location: 1435 - 3828 (-)
Type: CAZyme
Location: 1435 - 3828 (-)
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_18469_4
Type: TC
Location: 3912 - 4733 (-)
Type: TC
Location: 3912 - 4733 (-)
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_18469_5
Type: TC
Location: 4746 - 5624 (-)
Type: TC
Location: 4746 - 5624 (-)
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_18469_6
Type: TC
Location: 5639 - 7021 (-)
Type: TC
Location: 5639 - 7021 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter faecipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.