Cluster: ShaoY_2019_ERR3405922_bin.6_CGC27
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405922_bin.6
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405922_bin.6_k141_18293 | ShaoY_2019_ERR3405922_bin.6_k141_18293_28 | 25394 | 26335 | + | 3.A.1.1.10 |
| TC | ShaoY_2019_ERR3405922_bin.6_k141_18293 | ShaoY_2019_ERR3405922_bin.6_k141_18293_29 | 26351 | 27247 | + | 3.A.1.1.10 |
| STP | ShaoY_2019_ERR3405922_bin.6_k141_18293 | ShaoY_2019_ERR3405922_bin.6_k141_18293_30 | 27262 | 28968 | + | SBP_bac_1 |
| CAZyme | ShaoY_2019_ERR3405922_bin.6_k141_18293 | ShaoY_2019_ERR3405922_bin.6_k141_18293_31 | 28991 | 30484 | + | GH32 |
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_18293_28
Type: TC
Location: 25394 - 26335 (+)
Type: TC
Location: 25394 - 26335 (+)
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_18293_29
Type: TC
Location: 26351 - 27247 (+)
Type: TC
Location: 26351 - 27247 (+)
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_18293_30
Type: STP
Location: 27262 - 28968 (+)
Type: STP
Location: 27262 - 28968 (+)
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_18293_31
Type: CAZyme
Location: 28991 - 30484 (+)
Type: CAZyme
Location: 28991 - 30484 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter faecipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.