Cluster: ShaoY_2019_ERR3405922_bin.6_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405922_bin.6
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405922_bin.6_k141_7218 | ShaoY_2019_ERR3405922_bin.6_k141_7218_35 | 41193 | 43145 | + | 9.B.18.2.1 |
| pfam | ShaoY_2019_ERR3405922_bin.6_k141_7218 | ShaoY_2019_ERR3405922_bin.6_k141_7218_36 | 43147 | 44355 | + | Aminotran_1_2 | DegT_DnrJ_EryC1 | Cys_Met_Meta_PP |
| TC | ShaoY_2019_ERR3405922_bin.6_k141_7218 | ShaoY_2019_ERR3405922_bin.6_k141_7218_37 | 44362 | 45042 | + | 9.B.18.1.3 |
| CAZyme | ShaoY_2019_ERR3405922_bin.6_k141_7218 | ShaoY_2019_ERR3405922_bin.6_k141_7218_38 | 45059 | 46297 | + | GT4 |
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_7218_35
Type: TC
Location: 41193 - 43145 (+)
Type: TC
Location: 41193 - 43145 (+)
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_7218_36
Type: pfam
Location: 43147 - 44355 (+)
Type: pfam
Location: 43147 - 44355 (+)
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_7218_37
Type: TC
Location: 44362 - 45042 (+)
Type: TC
Location: 44362 - 45042 (+)
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_7218_38
Type: CAZyme
Location: 45059 - 46297 (+)
Type: CAZyme
Location: 45059 - 46297 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter faecipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.