Cluster: ShaoY_2019_ERR3405922_bin.6_CGC14
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405922_bin.6
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405922_bin.6_k141_6871 | ShaoY_2019_ERR3405922_bin.6_k141_6871_5 | 5961 | 7073 | - | GH53 |
| TC | ShaoY_2019_ERR3405922_bin.6_k141_6871 | ShaoY_2019_ERR3405922_bin.6_k141_6871_6 | 7154 | 7996 | - | 3.A.1.1.27 |
| TC | ShaoY_2019_ERR3405922_bin.6_k141_6871 | ShaoY_2019_ERR3405922_bin.6_k141_6871_7 | 7996 | 9441 | - | 3.A.1.1.27 |
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_6871_5
Type: CAZyme
Location: 5961 - 7073 (-)
Type: CAZyme
Location: 5961 - 7073 (-)
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_6871_6
Type: TC
Location: 7154 - 7996 (-)
Type: TC
Location: 7154 - 7996 (-)
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_6871_7
Type: TC
Location: 7996 - 9441 (-)
Type: TC
Location: 7996 - 9441 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter faecipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.