Cluster: ShaoY_2019_ERR3405922_bin.6_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405922_bin.6
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405922_bin.6_k141_6797 | ShaoY_2019_ERR3405922_bin.6_k141_6797_30 | 24475 | 25725 | + | 3.A.1.1.2 |
| TC | ShaoY_2019_ERR3405922_bin.6_k141_6797 | ShaoY_2019_ERR3405922_bin.6_k141_6797_31 | 25807 | 26694 | + | 3.A.1.1.2 |
| TC | ShaoY_2019_ERR3405922_bin.6_k141_6797 | ShaoY_2019_ERR3405922_bin.6_k141_6797_32 | 26691 | 27539 | + | 3.A.1.1.6 |
| CAZyme | ShaoY_2019_ERR3405922_bin.6_k141_6797 | ShaoY_2019_ERR3405922_bin.6_k141_6797_33 | 27536 | 29308 | + | CBM34 | GH13_20 |
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_6797_30
Type: TC
Location: 24475 - 25725 (+)
Type: TC
Location: 24475 - 25725 (+)
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_6797_31
Type: TC
Location: 25807 - 26694 (+)
Type: TC
Location: 25807 - 26694 (+)
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_6797_32
Type: TC
Location: 26691 - 27539 (+)
Type: TC
Location: 26691 - 27539 (+)
Gene ID: ShaoY_2019_ERR3405922_bin.6_k141_6797_33
Type: CAZyme
Location: 27536 - 29308 (+)
Type: CAZyme
Location: 27536 - 29308 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter faecipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.