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Cluster: ShaoY_2019_ERR3405906_bin.7_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3405906_bin.7_k141_4545 ShaoY_2019_ERR3405906_bin.7_k141_4545_26 22769 24121 - 3.B.1.1.1
NULL(UNKNOWN) ShaoY_2019_ERR3405906_bin.7_k141_4545 ShaoY_2019_ERR3405906_bin.7_k141_4545_27 24615 24932 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme ShaoY_2019_ERR3405906_bin.7_k141_4545 ShaoY_2019_ERR3405906_bin.7_k141_4545_28 25018 26118 - GT9
NULL(UNKNOWN) ShaoY_2019_ERR3405906_bin.7_k141_4545 ShaoY_2019_ERR3405906_bin.7_k141_4545_29 26291 27226 - NULL(UNKNOWN)
[View Structural Homologs]
pfam ShaoY_2019_ERR3405906_bin.7_k141_4545 ShaoY_2019_ERR3405906_bin.7_k141_4545_30 27235 28173 - NAGPA
CAZyme ShaoY_2019_ERR3405906_bin.7_k141_4545 ShaoY_2019_ERR3405906_bin.7_k141_4545_31 28185 28991 - CE4
Gene ID: ShaoY_2019_ERR3405906_bin.7_k141_4545_26
Type: TC
Location: 22769 - 24121 (-)
Gene ID: ShaoY_2019_ERR3405906_bin.7_k141_4545_27
Type:
Location: 24615 - 24932 (-)
Gene ID: ShaoY_2019_ERR3405906_bin.7_k141_4545_28
Type: CAZyme
Location: 25018 - 26118 (-)
Gene ID: ShaoY_2019_ERR3405906_bin.7_k141_4545_29
Type:
Location: 26291 - 27226 (-)
Gene ID: ShaoY_2019_ERR3405906_bin.7_k141_4545_30
Type: pfam
Location: 27235 - 28173 (-)
Gene ID: ShaoY_2019_ERR3405906_bin.7_k141_4545_31
Type: CAZyme
Location: 28185 - 28991 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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