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PROTEIN: ShaoY_2019_ERR3405906_bin.7_k141_4545_29

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Protein File & Metadata
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Source:
ShaoY_2019_ERR3405906_bin.7_k141_4545_29.pdb
Genome ID:
ShaoY_2019_ERR3405906_bin.7
Protein ID:
ShaoY_2019_ERR3405906_bin.7_k141_4545_29

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKPFTRVLSA   FVVGVLLQGG   VYLYLDQYMF   APTTEFNVSG   ASKDDTKNFP   DVKDGRKYVS 60
YDHQFMAVVT   DESLKIYKAG   ESKPTTVNLK   GRSISYFDWM   PDRNYAIMGL   YTDNKVIMAR 120
LNADDPEHEV   DTKLEDVPKG   SRIVDAAYSE   ATNVVYMKVK   VREGAYRIYR   TDANYDTRRV 180
YMQATDIGRI   AVFYDEDNFF   YDNAKTGDIF   MFNGIEGGWR   VINPPGRFRL   LGVDTSKTIY 240
IARVDEDNNV   LTVYSGKLGV   GFKPVYKYNN   PTTLSEVTMN   AVKDIIANGS   DDTTKVTEDT 300
DKSSKDSKKK   N 311
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-B4F8A5-F1-model_v4 7 293 1 282 0.5804 0.6735
AF-B0BNA7-F1-model_v4 24 301 19 324 0.5801 0.6847
AF-Q13347-F1-model_v4 24 301 19 324 0.5789 0.6836
AF-Q84Z07-F1-model_v4 19 293 1 277 0.5777 0.6804
AF-Q7ZV55-F1-model_v4 24 301 19 324 0.5762 0.6806
AF-I1MX41-F1-model_v4 3 293 3 286 0.5706 0.6643
AF-K7M609-F1-model_v4 3 292 3 286 0.57 0.6636
AF-Q6Z6C8-F1-model_v4 22 302 26 308 0.5677 0.6754
AF-Q9VL33-F1-model_v4 27 300 97 440 0.5527 0.7381
AF-A0A077Z0V1-F1-model_v4 27 288 65 375 0.546 0.7151
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A6H1P5T6-F1-model_v4 CBM50 23 288 158 473 0.5175 0.7299
UZD13854.1 CBM50 23 283 158 464 0.5108 0.7435
AF-A0A810E6E5-F1-model_v4 CBM50 23 287 158 472 0.4879 0.7482
A0A1H8SW06 CBM50 23 284 158 469 0.4879 0.7559
AF-A0A5Q2TEF5-F1-model_v4 CBM50 23 292 158 503 0.4851 0.7292
A0A975GAQ9 CBM54 2 307 83 1352 0.4179 0.7025
VEG07330.1 GH39 12 299 18 640 0.4002 0.6915
AF-A0A7I7XBZ3-F1-model_v4 GH39 19 289 57 443 0.3997 0.7209
A0A7G8PC81 GH39 2 290 83 658 0.388 0.6848
A0A518G9Z4 CBM57 27 272 522 839 0.3687 0.7812
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A160T2N2 GH39 51 287 1 256 0.6297 0.7635
UZD13854.1 CBM50 23 283 158 464 0.5108 0.7435
A0A1H8SW06 CBM50 23 284 158 469 0.4879 0.7559
A0A975GAQ9 CBM54 2 307 83 1352 0.4179 0.7025
VEG07330.1 GH39 12 299 18 640 0.4002 0.6915
A0A7G8PC81 GH39 2 290 83 658 0.388 0.6848
A0A7I7RXS4 GH39 19 289 302 692 0.3808 0.7126
A0A518G9Z4 CBM57 27 272 522 839 0.3687 0.7812
A0A7R8X6P4 GT58 1 299 294 717 0.3577 0.6558
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5gva-assembly1.cif.gz_A 27 297 21 305 0.6126 0.7145
8g2y-assembly1.cif.gz_B 28 287 23 291 0.6022 0.7148
4aez-assembly3.cif.gz_G 27 288 38 317 0.5991 0.731
8iw4-assembly1.cif.gz_B 27 295 26 302 0.5904 0.6913
6niy-assembly1.cif.gz_B 27 287 61 334 0.5716 0.7151
5mzh-assembly2.cif.gz_B 8 293 54 336 0.5696 0.7232
6c2y-assembly1.cif.gz_B 27 287 62 336 0.5665 0.7116
7t6t-assembly1.cif.gz_B 27 287 59 336 0.5629 0.7068
7mqa-assembly1.cif.gz_SG 7 298 9 389 0.5569 0.6736
6s5u-assembly5.cif.gz_E 28 290 19 300 0.5525 0.658
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q29L19-F1-model_v4 24 300 19 325 0.5806 0.6877
AF-B0BNA7-F1-model_v4 24 301 19 324 0.5801 0.6847
AF-B4NW98-F1-model_v4 27 300 14 321 0.5798 0.6895
AF-B4KGX9-F1-model_v4 27 300 14 321 0.5798 0.69
AF-Q5R7R2-F1-model_v4 27 301 18 324 0.5797 0.6892
AF-B4GSH1-F1-model_v4 27 301 18 326 0.5796 0.6893
AF-Q13347-F1-model_v4 24 301 19 324 0.5789 0.6836
AF-B4LUA5-F1-model_v4 27 300 14 321 0.5783 0.6882
AF-O02195-F1-model_v4 27 300 18 325 0.578 0.6902
AF-Q5IH81-F1-model_v4 27 301 18 324 0.575 0.6896
Download Full SwissProt Results