Cluster: ShaoY_2019_ERR3405869_bin.2_CGC31
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3405869_bin.2
- CGC Family ID: CGCFAM_00950
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405869_bin.2_k141_7961 | ShaoY_2019_ERR3405869_bin.2_k141_7961_260 | 303906 | 304700 | + | 8.A.3.2.4 |
| TC | ShaoY_2019_ERR3405869_bin.2_k141_7961 | ShaoY_2019_ERR3405869_bin.2_k141_7961_261 | 304713 | 305420 | + | 8.A.3.1.2 |
| pfam | ShaoY_2019_ERR3405869_bin.2_k141_7961 | ShaoY_2019_ERR3405869_bin.2_k141_7961_262 | 305443 | 306222 | + | CpsB_CapC |
| TC | ShaoY_2019_ERR3405869_bin.2_k141_7961 | ShaoY_2019_ERR3405869_bin.2_k141_7961_263 | 306222 | 306890 | + | 9.B.18.1.2 |
| CAZyme | ShaoY_2019_ERR3405869_bin.2_k141_7961 | ShaoY_2019_ERR3405869_bin.2_k141_7961_264 | 306890 | 307657 | + | GT111 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405869_bin.2_k141_7961 | ShaoY_2019_ERR3405869_bin.2_k141_7961_265 | 307705 | 309009 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | ShaoY_2019_ERR3405869_bin.2_k141_7961 | ShaoY_2019_ERR3405869_bin.2_k141_7961_266 | 309006 | 309971 | + | GT2 |
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_7961_260
Type: TC
Location: 303906 - 304700 (+)
Type: TC
Location: 303906 - 304700 (+)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_7961_261
Type: TC
Location: 304713 - 305420 (+)
Type: TC
Location: 304713 - 305420 (+)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_7961_262
Type: pfam
Location: 305443 - 306222 (+)
Type: pfam
Location: 305443 - 306222 (+)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_7961_263
Type: TC
Location: 306222 - 306890 (+)
Type: TC
Location: 306222 - 306890 (+)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_7961_264
Type: CAZyme
Location: 306890 - 307657 (+)
Type: CAZyme
Location: 306890 - 307657 (+)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_7961_265
Type:
Location: 307705 - 309009 (+)
Type:
Location: 307705 - 309009 (+)
Gene ID: ShaoY_2019_ERR3405869_bin.2_k141_7961_266
Type: CAZyme
Location: 309006 - 309971 (+)
Type: CAZyme
Location: 309006 - 309971 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_C
Species
Enterococcus_C myersii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.