PROTEIN: ShaoY_2019_ERR3405869_bin.2_k141_7961_265
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Protein File & Metadata
Source:
ShaoY_2019_ERR3405869_bin.2_k141_7961_265.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3405869_bin.2_k141_7961_265
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Protein Sequence
MTILGILIIL ILVFFDLILN KNLFSPVVMF SVLFVMIVAL AELRLYGIFE FSEKSVFLIL 60 TGVICFDLGN IIVVEFLKKY KNNTNVSKER IDFFDLNINW RVLKVLTAIV TLGNGTLFYY 120 ASRFLMQGGS YLRLRNALLG YNNELPLVEN PFFRFLVSYI SGPALYTLIP LAMIFIVRKE 180 HLFFSIVVFA NLIFNMISSG GRITIIYTVI QFLAVLSYSK IKISFRVKRG VFLFIGVAII 240 AVVGLSLTRS SNSFFKSVYT YFSCPVVLLS TWMDNADKMG LSSKGLSFIY PFTYIANMVT 300 NALGLSIDFL NSVVEWQKFP QEIWVPVFPQ QSMNAFCTLF YFFYQDLREF GVAFFSFIFG 360 IISGFVYFKA YIVKNIKYFV VFLLGVKAII GSFMIWQVGS TSFFLSLFLL LCCFKKNVRK 420 SKLINEINEL EYLN 434
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P37748-F1-model_v4 | 1 | 423 | 1 | 388 | 0.7441 |
0.8055 |
| AF-Q32EG1-F1-model_v4 | 1 | 419 | 1 | 376 | 0.7259 |
0.8021 |
| AF-Q329X2-F1-model_v4 | 1 | 422 | 12 | 428 | 0.6764 |
0.7359 |
| AF-A0A0H3GPV0-F1-model_v4 | 1 | 422 | 12 | 428 | 0.6763 |
0.734 |
| AF-P37458-F1-model_v4 | 1 | 422 | 12 | 428 | 0.676 |
0.7366 |
| AF-P27835-F1-model_v4 | 1 | 422 | 12 | 428 | 0.6752 |
0.7344 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UVP94250.1 | GT4 | 1 | 434 | 5 | 594 | 0.5807 |
0.7632 |
| AF-W0HLH9-F1-model_v4 | GT56 | 1 | 422 | 373 | 791 | 0.5346 |
0.7253 |
| WBY64485.1 | GT4 | 1 | 426 | 34 | 471 | 0.5263 |
0.7239 |
Structural Homologs -
CAZyme-ID50
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P37748-F1-model_v4 | 1 | 423 | 1 | 388 | 0.7441 |
0.8055 |
| AF-A8ACU6-F1-model_v4 | 1 | 422 | 12 | 429 | 0.6779 |
0.7356 |
| AF-B6I4D1-F1-model_v4 | 1 | 422 | 12 | 428 | 0.6778 |
0.7371 |
| AF-Q8FBP8-F1-model_v4 | 1 | 422 | 12 | 428 | 0.6777 |
0.7369 |
| AF-B1LLW7-F1-model_v4 | 1 | 422 | 12 | 428 | 0.6774 |
0.7366 |
| AF-Q83IX6-F1-model_v4 | 1 | 422 | 12 | 428 | 0.6774 |
0.7368 |
| AF-A1AHW3-F1-model_v4 | 1 | 422 | 12 | 428 | 0.6771 |
0.7365 |
| AF-B7MR15-F1-model_v4 | 1 | 422 | 12 | 428 | 0.6769 |
0.7363 |
| AF-B1IWA6-F1-model_v4 | 1 | 422 | 12 | 428 | 0.6769 |
0.7361 |
| AF-B2TTZ9-F1-model_v4 | 1 | 422 | 12 | 428 | 0.6765 |
0.7357 |