Cluster: ShaoY_2019_ERR3405833_bin.12_CGC36
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405833_bin.12
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405833_bin.12_k141_10485 | ShaoY_2019_ERR3405833_bin.12_k141_10485_76 | 73987 | 81345 | + | CBM32 | CBM51 | CBM51 | CBM51 |
| pfam | ShaoY_2019_ERR3405833_bin.12_k141_10485 | ShaoY_2019_ERR3405833_bin.12_k141_10485_77 | 81505 | 82449 | + | UbiA |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405833_bin.12_k141_10485 | ShaoY_2019_ERR3405833_bin.12_k141_10485_78 | 82796 | 82954 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | ShaoY_2019_ERR3405833_bin.12_k141_10485 | ShaoY_2019_ERR3405833_bin.12_k141_10485_79 | 83208 | 85292 | + | 5.A.3.3.1 |
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_10485_76
Type: CAZyme
Location: 73987 - 81345 (+)
Type: CAZyme
Location: 73987 - 81345 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_10485_77
Type: pfam
Location: 81505 - 82449 (+)
Type: pfam
Location: 81505 - 82449 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_10485_78
Type:
Location: 82796 - 82954 (-)
Type:
Location: 82796 - 82954 (-)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_10485_79
Type: TC
Location: 83208 - 85292 (+)
Type: TC
Location: 83208 - 85292 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp018372875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.