Cluster: ShaoY_2019_ERR3405833_bin.12_CGC25
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3405833_bin.12
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405833_bin.12_k141_9157 | ShaoY_2019_ERR3405833_bin.12_k141_9157_8 | 9610 | 9915 | + | 4.A.3.2.6 |
| TC | ShaoY_2019_ERR3405833_bin.12_k141_9157 | ShaoY_2019_ERR3405833_bin.12_k141_9157_9 | 9941 | 11245 | + | 4.A.3.2.8 |
| TC | ShaoY_2019_ERR3405833_bin.12_k141_9157 | ShaoY_2019_ERR3405833_bin.12_k141_9157_10 | 11300 | 11608 | + | 4.A.3.2.6 |
| CAZyme | ShaoY_2019_ERR3405833_bin.12_k141_9157 | ShaoY_2019_ERR3405833_bin.12_k141_9157_11 | 11705 | 13909 | + | GH3 |
| CAZyme | ShaoY_2019_ERR3405833_bin.12_k141_9157 | ShaoY_2019_ERR3405833_bin.12_k141_9157_12 | 13926 | 15350 | + | GH1 |
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_9157_8
Type: TC
Location: 9610 - 9915 (+)
Type: TC
Location: 9610 - 9915 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_9157_9
Type: TC
Location: 9941 - 11245 (+)
Type: TC
Location: 9941 - 11245 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_9157_10
Type: TC
Location: 11300 - 11608 (+)
Type: TC
Location: 11300 - 11608 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_9157_11
Type: CAZyme
Location: 11705 - 13909 (+)
Type: CAZyme
Location: 11705 - 13909 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_9157_12
Type: CAZyme
Location: 13926 - 15350 (+)
Type: CAZyme
Location: 13926 - 15350 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp018372875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.