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Cluster: ShaoY_2019_ERR3405833_bin.12_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ShaoY_2019_ERR3405833_bin.12_k141_9020 ShaoY_2019_ERR3405833_bin.12_k141_9020_33 33873 34964 - GH170
TC ShaoY_2019_ERR3405833_bin.12_k141_9020 ShaoY_2019_ERR3405833_bin.12_k141_9020_34 34952 36211 - 4.A.3.2.2
pfam ShaoY_2019_ERR3405833_bin.12_k141_9020 ShaoY_2019_ERR3405833_bin.12_k141_9020_35 36212 37366 - AnmK
STP ShaoY_2019_ERR3405833_bin.12_k141_9020 ShaoY_2019_ERR3405833_bin.12_k141_9020_36 37422 38321 - SIS
CAZyme ShaoY_2019_ERR3405833_bin.12_k141_9020 ShaoY_2019_ERR3405833_bin.12_k141_9020_37 38364 39398 - GH170
TC ShaoY_2019_ERR3405833_bin.12_k141_9020 ShaoY_2019_ERR3405833_bin.12_k141_9020_38 39411 40697 - 4.A.3.2.2
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_9020_33
Type: CAZyme
Location: 33873 - 34964 (-)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_9020_34
Type: TC
Location: 34952 - 36211 (-)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_9020_35
Type: pfam
Location: 36212 - 37366 (-)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_9020_36
Type: STP
Location: 37422 - 38321 (-)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_9020_37
Type: CAZyme
Location: 38364 - 39398 (-)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_9020_38
Type: TC
Location: 39411 - 40697 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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