Cluster: ShaoY_2019_ERR3405833_bin.12_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3405833_bin.12
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405833_bin.12_k141_7689 | ShaoY_2019_ERR3405833_bin.12_k141_7689_16 | 16222 | 19245 | + | GH2 |
| CAZyme | ShaoY_2019_ERR3405833_bin.12_k141_7689 | ShaoY_2019_ERR3405833_bin.12_k141_7689_17 | 19260 | 20357 | + | GH170 |
| TC | ShaoY_2019_ERR3405833_bin.12_k141_7689 | ShaoY_2019_ERR3405833_bin.12_k141_7689_18 | 20376 | 20696 | + | 4.A.3.2.1 |
| TC | ShaoY_2019_ERR3405833_bin.12_k141_7689 | ShaoY_2019_ERR3405833_bin.12_k141_7689_19 | 20718 | 22046 | + | 4.A.3.2.8 |
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_7689_16
Type: CAZyme
Location: 16222 - 19245 (+)
Type: CAZyme
Location: 16222 - 19245 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_7689_17
Type: CAZyme
Location: 19260 - 20357 (+)
Type: CAZyme
Location: 19260 - 20357 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_7689_18
Type: TC
Location: 20376 - 20696 (+)
Type: TC
Location: 20376 - 20696 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_7689_19
Type: TC
Location: 20718 - 22046 (+)
Type: TC
Location: 20718 - 22046 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp018372875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.