Cluster: ShaoY_2019_ERR3405833_bin.12_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405833_bin.12
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405833_bin.12_k141_7681 | ShaoY_2019_ERR3405833_bin.12_k141_7681_7 | 7181 | 9229 | - | GH39 |
| TC | ShaoY_2019_ERR3405833_bin.12_k141_7681 | ShaoY_2019_ERR3405833_bin.12_k141_7681_8 | 9377 | 11980 | + | 3.A.9.1.2 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405833_bin.12_k141_7681 | ShaoY_2019_ERR3405833_bin.12_k141_7681_9 | 12154 | 12546 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | ShaoY_2019_ERR3405833_bin.12_k141_7681 | ShaoY_2019_ERR3405833_bin.12_k141_7681_10 | 12715 | 12909 | - | SASP |
| TC | ShaoY_2019_ERR3405833_bin.12_k141_7681 | ShaoY_2019_ERR3405833_bin.12_k141_7681_11 | 13341 | 13937 | - | 2.A.87.2.3 |
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_7681_7
Type: CAZyme
Location: 7181 - 9229 (-)
Type: CAZyme
Location: 7181 - 9229 (-)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_7681_8
Type: TC
Location: 9377 - 11980 (+)
Type: TC
Location: 9377 - 11980 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_7681_9
Type:
Location: 12154 - 12546 (+)
Type:
Location: 12154 - 12546 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_7681_10
Type: pfam
Location: 12715 - 12909 (-)
Type: pfam
Location: 12715 - 12909 (-)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_7681_11
Type: TC
Location: 13341 - 13937 (-)
Type: TC
Location: 13341 - 13937 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp018372875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.