Cluster: ShaoY_2019_ERR3405833_bin.12_CGC16
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405833_bin.12
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405833_bin.12_k141_7363 | ShaoY_2019_ERR3405833_bin.12_k141_7363_34 | 30774 | 32636 | - | 4.A.1.2.6 |
| pfam | ShaoY_2019_ERR3405833_bin.12_k141_7363 | ShaoY_2019_ERR3405833_bin.12_k141_7363_35 | 32787 | 33617 | - | PRD | PRD | CAT_RBD |
| CAZyme | ShaoY_2019_ERR3405833_bin.12_k141_7363 | ShaoY_2019_ERR3405833_bin.12_k141_7363_36 | 33939 | 35372 | - | GH1 |
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_7363_34
Type: TC
Location: 30774 - 32636 (-)
Type: TC
Location: 30774 - 32636 (-)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_7363_35
Type: pfam
Location: 32787 - 33617 (-)
Type: pfam
Location: 32787 - 33617 (-)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_7363_36
Type: CAZyme
Location: 33939 - 35372 (-)
Type: CAZyme
Location: 33939 - 35372 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp018372875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.