Cluster: ShaoY_2019_ERR3405833_bin.12_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405833_bin.12
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405833_bin.12_k141_6422 | ShaoY_2019_ERR3405833_bin.12_k141_6422_40 | 40205 | 41350 | - | GH25 |
| pfam | ShaoY_2019_ERR3405833_bin.12_k141_6422 | ShaoY_2019_ERR3405833_bin.12_k141_6422_41 | 41842 | 42909 | + | NMO |
| pfam | ShaoY_2019_ERR3405833_bin.12_k141_6422 | ShaoY_2019_ERR3405833_bin.12_k141_6422_42 | 42946 | 43935 | - | GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3 |
| TC | ShaoY_2019_ERR3405833_bin.12_k141_6422 | ShaoY_2019_ERR3405833_bin.12_k141_6422_43 | 44279 | 44938 | - | 9.B.27.1.2 |
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_6422_40
Type: CAZyme
Location: 40205 - 41350 (-)
Type: CAZyme
Location: 40205 - 41350 (-)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_6422_41
Type: pfam
Location: 41842 - 42909 (+)
Type: pfam
Location: 41842 - 42909 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_6422_42
Type: pfam
Location: 42946 - 43935 (-)
Type: pfam
Location: 42946 - 43935 (-)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_6422_43
Type: TC
Location: 44279 - 44938 (-)
Type: TC
Location: 44279 - 44938 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp018372875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.