Cluster: ShaoY_2019_ERR3405833_bin.12_CGC13
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405833_bin.12
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405833_bin.12_k141_6171 | ShaoY_2019_ERR3405833_bin.12_k141_6171_119 | 108647 | 110491 | + | 4.A.1.2.11 |
| CAZyme | ShaoY_2019_ERR3405833_bin.12_k141_6171 | ShaoY_2019_ERR3405833_bin.12_k141_6171_120 | 110514 | 111968 | + | GH1 |
| TC | ShaoY_2019_ERR3405833_bin.12_k141_6171 | ShaoY_2019_ERR3405833_bin.12_k141_6171_121 | 111972 | 112898 | + | 2.A.10.1.4 |
| TF | ShaoY_2019_ERR3405833_bin.12_k141_6171 | ShaoY_2019_ERR3405833_bin.12_k141_6171_122 | 113120 | 114124 | - | 0035607 |
| STP | ShaoY_2019_ERR3405833_bin.12_k141_6171 | ShaoY_2019_ERR3405833_bin.12_k141_6171_123 | 114328 | 115278 | + | Peripla_BP_2 |
| TC | ShaoY_2019_ERR3405833_bin.12_k141_6171 | ShaoY_2019_ERR3405833_bin.12_k141_6171_124 | 115265 | 116257 | + | 3.A.1.14.15 |
| TC | ShaoY_2019_ERR3405833_bin.12_k141_6171 | ShaoY_2019_ERR3405833_bin.12_k141_6171_125 | 116257 | 117264 | + | 3.A.1.14.15 |
| TC | ShaoY_2019_ERR3405833_bin.12_k141_6171 | ShaoY_2019_ERR3405833_bin.12_k141_6171_126 | 117267 | 118061 | + | 3.A.1.14.7 |
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_6171_119
Type: TC
Location: 108647 - 110491 (+)
Type: TC
Location: 108647 - 110491 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_6171_120
Type: CAZyme
Location: 110514 - 111968 (+)
Type: CAZyme
Location: 110514 - 111968 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_6171_121
Type: TC
Location: 111972 - 112898 (+)
Type: TC
Location: 111972 - 112898 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_6171_122
Type: TF
Location: 113120 - 114124 (-)
Type: TF
Location: 113120 - 114124 (-)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_6171_123
Type: STP
Location: 114328 - 115278 (+)
Type: STP
Location: 114328 - 115278 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_6171_124
Type: TC
Location: 115265 - 116257 (+)
Type: TC
Location: 115265 - 116257 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_6171_125
Type: TC
Location: 116257 - 117264 (+)
Type: TC
Location: 116257 - 117264 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_6171_126
Type: TC
Location: 117267 - 118061 (+)
Type: TC
Location: 117267 - 118061 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp018372875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.