dbCAN Logo

Cluster: ShaoY_2019_ERR3405833_bin.12_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3405833_bin.12_k141_4662 ShaoY_2019_ERR3405833_bin.12_k141_4662_38 37102 37539 + 4.A.6.1.9
TC ShaoY_2019_ERR3405833_bin.12_k141_4662 ShaoY_2019_ERR3405833_bin.12_k141_4662_39 37530 38000 + 4.A.6.1.9
TC ShaoY_2019_ERR3405833_bin.12_k141_4662 ShaoY_2019_ERR3405833_bin.12_k141_4662_40 38036 38821 + 4.A.6.1.9
TC ShaoY_2019_ERR3405833_bin.12_k141_4662 ShaoY_2019_ERR3405833_bin.12_k141_4662_41 38818 39627 + 4.A.6.1.9
CAZyme ShaoY_2019_ERR3405833_bin.12_k141_4662 ShaoY_2019_ERR3405833_bin.12_k141_4662_42 39676 41982 + GH95
CAZyme ShaoY_2019_ERR3405833_bin.12_k141_4662 ShaoY_2019_ERR3405833_bin.12_k141_4662_43 42020 44266 + CBM47 | GH98
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_4662_38
Type: TC
Location: 37102 - 37539 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_4662_39
Type: TC
Location: 37530 - 38000 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_4662_40
Type: TC
Location: 38036 - 38821 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_4662_41
Type: TC
Location: 38818 - 39627 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_4662_42
Type: CAZyme
Location: 39676 - 41982 (+)
Gene ID: ShaoY_2019_ERR3405833_bin.12_k141_4662_43
Type: CAZyme
Location: 42020 - 44266 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List