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Cluster: ShaoY_2019_ERR3405831_bin.2_CGC98

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ShaoY_2019_ERR3405831_bin.2_k141_5256 ShaoY_2019_ERR3405831_bin.2_k141_5256_231 306113 306820 + CE14
NULL(UNKNOWN) ShaoY_2019_ERR3405831_bin.2_k141_5256 ShaoY_2019_ERR3405831_bin.2_k141_5256_232 306880 307836 + NULL(UNKNOWN)
[View Structural Homologs]
TC ShaoY_2019_ERR3405831_bin.2_k141_5256 ShaoY_2019_ERR3405831_bin.2_k141_5256_233 307848 308825 + 3.A.1.2.19
TC ShaoY_2019_ERR3405831_bin.2_k141_5256 ShaoY_2019_ERR3405831_bin.2_k141_5256_234 308851 310329 + 3.A.1.2.3
STP ShaoY_2019_ERR3405831_bin.2_k141_5256 ShaoY_2019_ERR3405831_bin.2_k141_5256_235 310425 311477 + Peripla_BP_1
CAZyme ShaoY_2019_ERR3405831_bin.2_k141_5256 ShaoY_2019_ERR3405831_bin.2_k141_5256_236 311575 312624 + GH179
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5256_231
Type: CAZyme
Location: 306113 - 306820 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5256_232
Type:
Location: 306880 - 307836 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5256_233
Type: TC
Location: 307848 - 308825 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5256_234
Type: TC
Location: 308851 - 310329 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5256_235
Type: STP
Location: 310425 - 311477 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5256_236
Type: CAZyme
Location: 311575 - 312624 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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