PROTEIN: ShaoY_2019_ERR3405831_bin.2_k141_5256_232
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Protein File & Metadata
Source:
ShaoY_2019_ERR3405831_bin.2_k141_5256_232.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3405831_bin.2_k141_5256_232
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Protein Sequence
MKINFNETVG GSLLEGFYPK GWDMEKIDKC CSHNPKDISV RQDFWNPDFH IAACKSVEEF 60 NVKLGHEIAL EIRESKEKGQ TLALILPVGP MGMYEWIVYY LKRWNVSCDH LYCFNMDEWA 120 DKDGNTLDST DPGSFQYAME HAFYNPLGEL TVPESHRNFA TSDNLPVYPE KIKRLKEQGA 180 RLVTVYGIGR MCHIAFWEPH FAAEFETDDA WKEQCYRKGA LLHPLTIEQN ALTSFKSRTT 240 LVPCTANTIG PGLFLQSDRM IGGADGAFSR GMQWQGMSLW MTLRYGPTRW VTSSYIPTVP 300 GTLLYLEELA GPLVAECN 318
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P42912-F1-model_v4 | 34 | 309 | 9 | 251 | 0.7574 |
0.8871 |
| AF-Q2G0K8-F1-model_v4 | 49 | 313 | 1 | 242 | 0.7571 |
0.8915 |
| AF-A0A132YZ81-F1-model_v4 | 49 | 313 | 1 | 233 | 0.7569 |
0.887 |
| AF-Q04802-F1-model_v4 | 49 | 313 | 1 | 245 | 0.7547 |
0.872 |
| AF-Q9XVJ2-F1-model_v4 | 49 | 313 | 1 | 246 | 0.751 |
0.8964 |
| AF-Q8ZQX7-F1-model_v4 | 49 | 313 | 1 | 247 | 0.7482 |
0.8881 |
| AF-Q8DPA1-F1-model_v4 | 49 | 313 | 1 | 233 | 0.7482 |
0.8814 |
| AF-Q54XK9-F1-model_v4 | 49 | 313 | 1 | 250 | 0.7481 |
0.8792 |
| AF-A0A0H3GK04-F1-model_v4 | 49 | 313 | 1 | 247 | 0.7478 |
0.8878 |
| AF-Q32IQ2-F1-model_v4 | 49 | 313 | 1 | 247 | 0.7478 |
0.8877 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A5Z828 | GH20 | 49 | 300 | 1 | 280 | 0.565 |
0.7101 |
| AF-G0IWQ0-F1-model_v4 | CE9 | 49 | 314 | 1 | 245 | 0.5202 |
0.8896 |
| AF-A0A0H4PAS9-F1-model_v4 | CE9 | 49 | 315 | 1 | 246 | 0.5196 |
0.8858 |
| AF-A0A1W2H3T6-F1-model_v4 | CE9 | 49 | 313 | 1 | 243 | 0.5164 |
0.8898 |
| AF-J9UUU6-F1-model_v4 | CE9 | 49 | 313 | 1 | 239 | 0.4985 |
0.8855 |
| AF-K0JLB5-F1-model_v4 | CE9 | 49 | 313 | 1 | 239 | 0.4956 |
0.8802 |
| AF-A0A3B6VIU1-F1-model_v4 | CE9 | 49 | 313 | 1 | 239 | 0.4947 |
0.8783 |
| AF-D8I9Y7-F1-model_v4 | CE9 | 49 | 313 | 1 | 239 | 0.4944 |
0.8777 |
| AF-D5U6N5-F1-model_v4 | CE9 | 49 | 313 | 1 | 239 | 0.4943 |
0.8775 |
| AF-G0ELA3-F1-model_v4 | CE9 | 49 | 313 | 1 | 239 | 0.4942 |
0.8773 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A5Z828 | GH20 | 49 | 300 | 1 | 280 | 0.565 |
0.7101 |
| A0A0H4PAS9 | CE9 | 49 | 315 | 1 | 246 | 0.5196 |
0.8858 |
| A0A3B6VIU1 | CE9 | 49 | 313 | 1 | 239 | 0.4947 |
0.8783 |
| U5ECU6 | CE9 | 45 | 313 | 388 | 631 | 0.4873 |
0.8421 |
| A0A871RFD9 | GH3 | 23 | 313 | 968 | 1250 | 0.4437 |
0.7939 |
| A0A875S4F4 | GH3 | 36 | 314 | 832 | 1287 | 0.4374 |
0.7995 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2bkv-assembly1.cif.gz_A | 49 | 313 | 1 | 241 | 0.7726 |
0.8926 |
| 5hj5-assembly2.cif.gz_B | 49 | 314 | 1 | 248 | 0.7499 |
0.8882 |
| 3oc6-assembly1.cif.gz_A | 46 | 313 | 1 | 243 | 0.7389 |
0.8523 |
| 4tm7-assembly1.cif.gz_A | 46 | 313 | 1 | 243 | 0.7386 |
0.852 |
| 7lqm-assembly2.cif.gz_D | 49 | 314 | 1 | 248 | 0.7383 |
0.8748 |
| 7lqn-assembly2.cif.gz_I | 46 | 313 | 1 | 248 | 0.7379 |
0.8664 |
| 7lqm-assembly1.cif.gz_A | 49 | 313 | 1 | 243 | 0.7363 |
0.875 |
| 1cd5-assembly1.cif.gz_A | 49 | 313 | 1 | 247 | 0.7333 |
0.8717 |
| 1ne7-assembly1.cif.gz_E | 49 | 313 | 1 | 247 | 0.7325 |
0.8829 |
| 3tx2-assembly1.cif.gz_A | 44 | 313 | 1 | 246 | 0.7318 |
0.8416 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q97MK9-F1-model_v4 | 49 | 313 | 1 | 241 | 0.78 |
0.8999 |
| AF-C3L2N7-F1-model_v4 | 49 | 313 | 1 | 241 | 0.7783 |
0.9032 |
| AF-C1FV12-F1-model_v4 | 49 | 313 | 1 | 241 | 0.778 |
0.9029 |
| AF-Q4L9T8-F1-model_v4 | 49 | 313 | 1 | 242 | 0.7774 |
0.8961 |
| AF-B1IKY4-F1-model_v4 | 49 | 313 | 1 | 241 | 0.7772 |
0.9021 |
| AF-A7FX73-F1-model_v4 | 49 | 313 | 1 | 241 | 0.777 |
0.9019 |
| AF-A8MIX7-F1-model_v4 | 49 | 313 | 1 | 241 | 0.7769 |
0.8966 |
| AF-A5I5R9-F1-model_v4 | 49 | 313 | 1 | 241 | 0.7768 |
0.9016 |
| AF-B1KZ07-F1-model_v4 | 49 | 313 | 1 | 241 | 0.7766 |
0.9015 |
| AF-A7GH51-F1-model_v4 | 49 | 313 | 1 | 241 | 0.7765 |
0.9014 |