Cluster: ShaoY_2019_ERR3405831_bin.2_CGC85
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 7
- Substrate:
- Genome ID: ShaoY_2019_ERR3405831_bin.2
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405831_bin.2_k141_4852 | ShaoY_2019_ERR3405831_bin.2_k141_4852_170 | 180168 | 181112 | + | 3.A.1.1.10 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_4852 | ShaoY_2019_ERR3405831_bin.2_k141_4852_171 | 181142 | 182011 | + | 3.A.1.1.10 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405831_bin.2_k141_4852 | ShaoY_2019_ERR3405831_bin.2_k141_4852_172 | 182070 | 183779 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_4852 | ShaoY_2019_ERR3405831_bin.2_k141_4852_173 | 184014 | 187130 | + | GH2 |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_4852 | ShaoY_2019_ERR3405831_bin.2_k141_4852_174 | 187132 | 188214 | + | CE15 |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_4852 | ShaoY_2019_ERR3405831_bin.2_k141_4852_175 | 188369 | 190891 | + | GH95 |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_4852 | ShaoY_2019_ERR3405831_bin.2_k141_4852_176 | 190951 | 193665 | + | GH138 |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_4852 | ShaoY_2019_ERR3405831_bin.2_k141_4852_177 | 193700 | 195046 | + | GH29 |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_4852 | ShaoY_2019_ERR3405831_bin.2_k141_4852_178 | 195098 | 197134 | + | GH42 |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_4852 | ShaoY_2019_ERR3405831_bin.2_k141_4852_179 | 197219 | 199528 | + | GH31_4 |
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_4852_170
Type: TC
Location: 180168 - 181112 (+)
Type: TC
Location: 180168 - 181112 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_4852_171
Type: TC
Location: 181142 - 182011 (+)
Type: TC
Location: 181142 - 182011 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_4852_172
Type:
Location: 182070 - 183779 (+)
Type:
Location: 182070 - 183779 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_4852_173
Type: CAZyme
Location: 184014 - 187130 (+)
Type: CAZyme
Location: 184014 - 187130 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_4852_174
Type: CAZyme
Location: 187132 - 188214 (+)
Type: CAZyme
Location: 187132 - 188214 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_4852_175
Type: CAZyme
Location: 188369 - 190891 (+)
Type: CAZyme
Location: 188369 - 190891 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_4852_176
Type: CAZyme
Location: 190951 - 193665 (+)
Type: CAZyme
Location: 190951 - 193665 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_4852_177
Type: CAZyme
Location: 193700 - 195046 (+)
Type: CAZyme
Location: 193700 - 195046 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_4852_178
Type: CAZyme
Location: 195098 - 197134 (+)
Type: CAZyme
Location: 195098 - 197134 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_4852_179
Type: CAZyme
Location: 197219 - 199528 (+)
Type: CAZyme
Location: 197219 - 199528 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900555455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.