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PROTEIN: ShaoY_2019_ERR3405831_bin.2_k141_4852_172

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Protein File & Metadata
Download PDB File
Source:
ShaoY_2019_ERR3405831_bin.2_k141_4852_172.pdb
Genome ID:
ShaoY_2019_ERR3405831_bin.2
Protein ID:
ShaoY_2019_ERR3405831_bin.2_k141_4852_172

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKKNLKKQAA   LGLAAVLAAS   ALAGCGGSDG   KTTEASKTEG   TQAEAGTGET   TGGESAGGET 60
TGTGNNGDRM   TISVMGIDWG   YGPLANSEME   QYWEDLFDVN   LEIEWVNYQD   YDQKVNTLIA 120
ANSMPDVIQV   SKQGNGSYYY   PVFTQAVDAG   SFVDMTPYLF   DNGNGIAETN   AVMKNWDEAM 180
WDQARYNGGI   YILPRSKAES   GQNSGIEVRK   DLMEKYNFTE   EPKTMDELKT   WLIDLSKAAS 240
EGEGKKIYAL   EYFDDDFMND   RIKAFAVAFT   GQSDWSVNEN   GEFEYMQFKD   EYINFLNWMK 300
DLYDAGALDP   EFALANADTS   KWKAGNSVAY   LTAWYNWNQS   ADLTSNKIFD   ESTGPELKAW 360
CLMPVKGDKA   YTVSPNYTDI   DSCIAISAKC   SEEKIKKIME   VFNATEETYP   GYDSVMMDGV 420
QDVHYTLKED   GTKNTDDEVF   KKKRQDGYVG   AWNQIFLKKD   ADQITDKFMK   DGTKRASDEN 480
IAKVKEIKDF   VYSDLKETGM   KNAISNLQST   TYNNNWNVLT   DDVNTLCAQY   IMGQIGETEW 540
KTFVEGIVDS   PDYKAIQQEF   KDAAAEAAK 569
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A133D019-F1-model_v4 1 569 4 485 0.669 0.7434
AF-A0A133CKQ7-F1-model_v4 54 560 28 419 0.5983 0.7442
AF-A0A0H3GX53-F1-model_v4 65 563 19 428 0.5946 0.7193
AF-A0A0H3GKJ8-F1-model_v4 67 558 24 407 0.5883 0.7384
AF-P59214-F1-model_v4 67 562 37 423 0.5831 0.7367
AF-Q8DRJ6-F1-model_v4 15 569 7 512 0.5697 0.628
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 68 569 44 506 0.6856 0.8034
AF-K8EJG7-F1-model_v4 CBM50 , CE4 67 562 31 417 0.5889 0.7395
AF-A0A1Q2TKJ3-F1-model_v4 GH49 4 560 79 797 0.4872 0.5871
UJP10085.1 GH154 1 534 150 1170 0.3408 0.5144
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 68 569 44 506 0.6856 0.8034
K8EJG7 CBM50 , CE4 67 562 31 417 0.5889 0.7395
A0A9Q8PNJ5 GH4 1 559 225 866 0.4992 0.6176
A0A1Q2TKJ3 GH49 4 560 79 797 0.4872 0.5871
UJP10085.1 GH154 1 534 150 1170 0.3408 0.5144
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
6fth-assembly1.cif.gz_A 67 569 1 496 0.7183 0.7824
3omb-assembly1.cif.gz_A 65 569 3 503 0.7169 0.7789
5g5y-assembly1.cif.gz_A 67 569 1 492 0.6885 0.7578
5suo-assembly1.cif.gz_A 69 569 1 450 0.6817 0.7772
5xs8-assembly1.cif.gz_A 66 568 1 474 0.6738 0.7531
7c6x-assembly7.cif.gz_G 71 563 1 416 0.6552 0.7716
3u1o-assembly2.cif.gz_B 67 560 2 407 0.6552 0.7786
7c6z-assembly1.cif.gz_A 71 559 1 415 0.6537 0.7699
4jxi-assembly2.cif.gz_B 68 560 1 405 0.6536 0.7772
7c71-assembly2.cif.gz_B 71 559 1 415 0.6532 0.7695
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q795R2-F1-model_v4 67 568 38 498 0.7564 0.8796
AF-P37966-F1-model_v4 66 568 32 502 0.755 0.8649
AF-A0A0H2URD6-F1-model_v4 55 569 25 536 0.6678 0.7364
AF-O31518-F1-model_v4 68 559 31 427 0.6413 0.7956
AF-Q00749-F1-model_v4 63 562 29 420 0.6118 0.7623
AF-O07009-F1-model_v4 67 563 33 421 0.5903 0.7412
AF-Q9K491-F1-model_v4 66 560 35 424 0.5901 0.7422
AF-P59214-F1-model_v4 67 562 37 423 0.5831 0.7367
AF-P58300-F1-model_v4 69 559 56 434 0.55 0.7148
AF-Q9V297-F1-model_v4 69 559 75 453 0.5403 0.7163
Download Full SwissProt Results