Cluster: ShaoY_2019_ERR3405831_bin.2_CGC81
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3405831_bin.2
- CGC Family ID: CGCFAM_07584
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_4807 | ShaoY_2019_ERR3405831_bin.2_k141_4807_1 | 191 | 3283 | + | GH38 |
| peptidase | ShaoY_2019_ERR3405831_bin.2_k141_4807 | ShaoY_2019_ERR3405831_bin.2_k141_4807_2 | 3385 | 4812 | + | M17.UPW |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405831_bin.2_k141_4807 | ShaoY_2019_ERR3405831_bin.2_k141_4807_3 | 4809 | 6419 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_4807 | ShaoY_2019_ERR3405831_bin.2_k141_4807_4 | 6454 | 8118 | + | GH123 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_4807 | ShaoY_2019_ERR3405831_bin.2_k141_4807_5 | 8154 | 9935 | + | 8.A.59.2.1 |
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_4807_1
Type: CAZyme
Location: 191 - 3283 (+)
Type: CAZyme
Location: 191 - 3283 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_4807_2
Type: peptidase
Location: 3385 - 4812 (+)
Type: peptidase
Location: 3385 - 4812 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_4807_3
Type:
Location: 4809 - 6419 (+)
Type:
Location: 4809 - 6419 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_4807_4
Type: CAZyme
Location: 6454 - 8118 (+)
Type: CAZyme
Location: 6454 - 8118 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_4807_5
Type: TC
Location: 8154 - 9935 (+)
Type: TC
Location: 8154 - 9935 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900555455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.