Cluster: ShaoY_2019_ERR3405831_bin.2_CGC67
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405831_bin.2
- CGC Family ID: CGCFAM_00021
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_3558 | ShaoY_2019_ERR3405831_bin.2_k141_3558_2 | 733 | 3225 | + | GH38 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405831_bin.2_k141_3558 | ShaoY_2019_ERR3405831_bin.2_k141_3558_3 | 3278 | 5515 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | ShaoY_2019_ERR3405831_bin.2_k141_3558 | ShaoY_2019_ERR3405831_bin.2_k141_3558_4 | 5545 | 7611 | + | URO-D | URO-D |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_3558 | ShaoY_2019_ERR3405831_bin.2_k141_3558_5 | 7940 | 8878 | + | 3.A.1.1.10 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_3558 | ShaoY_2019_ERR3405831_bin.2_k141_3558_6 | 8894 | 9778 | + | 3.A.1.1.29 |
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_3558_2
Type: CAZyme
Location: 733 - 3225 (+)
Type: CAZyme
Location: 733 - 3225 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_3558_3
Type:
Location: 3278 - 5515 (+)
Type:
Location: 3278 - 5515 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_3558_4
Type: pfam
Location: 5545 - 7611 (+)
Type: pfam
Location: 5545 - 7611 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_3558_5
Type: TC
Location: 7940 - 8878 (+)
Type: TC
Location: 7940 - 8878 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_3558_6
Type: TC
Location: 8894 - 9778 (+)
Type: TC
Location: 8894 - 9778 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900555455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.