PROTEIN: ShaoY_2019_ERR3405831_bin.2_k141_3558_3
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Protein File & Metadata
Source:
ShaoY_2019_ERR3405831_bin.2_k141_3558_3.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3405831_bin.2_k141_3558_3
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Protein Sequence
MEYQIVLKQF HESTPVLEEQ WKPDRSIKEQ WKNMDQIPCR IQCIRSDEEN EQRFLLRTEM 60 IHASEKPISI SLEFINEEWT GREYVFMPAA VYDGNRMESK RIPYPPFHAG RRSEGWDRVI 120 TDIPHLNKEG NKSGISMRSG DMSTPAMGYF MEDQREGVLI LANHIVHGRY TGFTVSEMES 180 QAVFGVSCPA VREEKKYFFG ELPDGSGFYP TCEAPSDDVG ILLREGERVE MEIRYFRFPA 240 ENLNQYFTKF NELREEMEKG QEFCSIPFSK AYEAIKEKYI HMNFTDEGYY RVGTENDVPP 300 SYWQSGWVGG GMNSYAFLLE DNGLAHSQSL SSLKFITEHL QMENGWYIPM YANGQRYGDD 360 FLNKDSPVLL VRKDADLLYF LIKQAFYLKS QGELPELMES SITRQADAFV RFYQKNGQLG 420 QFINMQQETI LQGDTASAAI ASAALVLAYE YFKREEYLET AEALGVLYWE EYLKKGMLNG 480 GPGEICQAPD SESAFGFLES CVQLYETTGK EKWLQASREA FELAVTWVMS YDFHLPERST 540 AAKMKAHTRG TVFANAQNKH SAPGICTLSG NSMLKLYRFT GDQKYLNWMS RISHSLSQFV 600 SLQERPVDTL AGRALPAGYI NERVQTSDWE GKETIGEFLY GSNWPEVTML LTYVEIPGIY 660 LDLDRRVLQC SDHIIAEIVK EDEREMLIKI CNPTPYDAVV TLMTDHSLDP VSIGHQYYKE 720 MQKIEISAGM VINAVISVCE TKNRS 745
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-U7Q602-F1-model_v4 | 1 | 742 | 60 | 848 | 0.6289 |
0.7142 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WJK45749.1 | GH0 | 1 | 741 | 41 | 772 | 0.8997 |
0.9402 |
| A0A268K8D9 | GH182 | 1 | 674 | 26 | 673 | 0.8171 |
0.8978 |
| WHP16390.1 | GH182 | 1 | 675 | 6 | 673 | 0.814 |
0.869 |
| AF-A0A4Y1VDV5-F1-model_v4 | GH182 | 1 | 745 | 14 | 666 | 0.8046 |
0.8741 |
| AF-A0A109W1T4-F1-model_v4 | GH182 | 1 | 745 | 18 | 657 | 0.8027 |
0.8826 |
| AF-F0SA38-F1-model_v4 | GH182 | 1 | 745 | 23 | 671 | 0.8021 |
0.8796 |
| AF-A0A6G7C516-F1-model_v4 | GH182 | 1 | 745 | 23 | 671 | 0.8015 |
0.8788 |
| AF-A0A448L4J4-F1-model_v4 | GH182 | 1 | 717 | 23 | 664 | 0.8015 |
0.8833 |
| A0A9E8YN59 | GH182 | 1 | 745 | 19 | 668 | 0.8014 |
0.876 |
| AF-A0A7G1I4T0-F1-model_v4 | GH182 | 1 | 745 | 22 | 674 | 0.8012 |
0.8755 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A268K8D9 | GH182 | 1 | 674 | 26 | 673 | 0.8171 |
0.8978 |
| WHP16390.1 | GH182 | 1 | 675 | 6 | 673 | 0.814 |
0.869 |
| A0A9E8YN59 | GH182 | 1 | 745 | 19 | 668 | 0.8014 |
0.876 |
| A0A255SPN4 | GH182 | 1 | 745 | 22 | 666 | 0.8009 |
0.8803 |
| UJH67547.1 | GH182 | 1 | 745 | 30 | 673 | 0.7874 |
0.8717 |
| A0A139L1L8 | GH182 | 1 | 745 | 49 | 703 | 0.7836 |
0.8715 |
| A0A6I6K1P7 | GH182 | 1 | 676 | 41 | 678 | 0.7647 |
0.8579 |
| A0A2S0VPZ6 | GH182 | 1 | 741 | 54 | 721 | 0.7583 |
0.8385 |
| A0A1U9NH28 | GH182 | 1 | 674 | 47 | 681 | 0.7576 |
0.8554 |
| WJH33832.1 | GH182 | 167 | 744 | 1 | 523 | 0.6487 |
0.7832 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5nok-assembly2.cif.gz_B | 1 | 718 | 3 | 669 | 0.5733 |
0.6178 |
| 5nok-assembly1.cif.gz_A | 1 | 718 | 7 | 668 | 0.5683 |
0.6156 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.