Cluster: ShaoY_2019_ERR3405831_bin.2_CGC109
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate: xylan
- Genome ID: ShaoY_2019_ERR3405831_bin.2
- CGC Family ID: CGCFAM_01812
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405831_bin.2_k141_5721 | ShaoY_2019_ERR3405831_bin.2_k141_5721_7 | 8322 | 9683 | + | 9.A.40.2.2 |
| peptidase | ShaoY_2019_ERR3405831_bin.2_k141_5721 | ShaoY_2019_ERR3405831_bin.2_k141_5721_8 | 9707 | 10435 | + | M20.UNW |
| STP | ShaoY_2019_ERR3405831_bin.2_k141_5721 | ShaoY_2019_ERR3405831_bin.2_k141_5721_9 | 10790 | 11794 | + | Peripla_BP_1 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_5721 | ShaoY_2019_ERR3405831_bin.2_k141_5721_10 | 11820 | 13334 | + | 3.A.1.2.20 |
| TC | ShaoY_2019_ERR3405831_bin.2_k141_5721 | ShaoY_2019_ERR3405831_bin.2_k141_5721_11 | 13324 | 14313 | + | 3.A.1.2.15 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405831_bin.2_k141_5721 | ShaoY_2019_ERR3405831_bin.2_k141_5721_12 | 14317 | 16650 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_5721 | ShaoY_2019_ERR3405831_bin.2_k141_5721_13 | 16647 | 17435 | + | GH43_11 |
| CAZyme | ShaoY_2019_ERR3405831_bin.2_k141_5721 | ShaoY_2019_ERR3405831_bin.2_k141_5721_14 | 17481 | 18299 | + | CBM91 |
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5721_7
Type: TC
Location: 8322 - 9683 (+)
Type: TC
Location: 8322 - 9683 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5721_8
Type: peptidase
Location: 9707 - 10435 (+)
Type: peptidase
Location: 9707 - 10435 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5721_9
Type: STP
Location: 10790 - 11794 (+)
Type: STP
Location: 10790 - 11794 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5721_10
Type: TC
Location: 11820 - 13334 (+)
Type: TC
Location: 11820 - 13334 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5721_11
Type: TC
Location: 13324 - 14313 (+)
Type: TC
Location: 13324 - 14313 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5721_12
Type:
Location: 14317 - 16650 (+)
Type:
Location: 14317 - 16650 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5721_13
Type: CAZyme
Location: 16647 - 17435 (+)
Type: CAZyme
Location: 16647 - 17435 (+)
Gene ID: ShaoY_2019_ERR3405831_bin.2_k141_5721_14
Type: CAZyme
Location: 17481 - 18299 (+)
Type: CAZyme
Location: 17481 - 18299 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900555455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.