PROTEIN: ShaoY_2019_ERR3405831_bin.2_k141_5721_12
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Protein File & Metadata
Source:
ShaoY_2019_ERR3405831_bin.2_k141_5721_12.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3405831_bin.2_k141_5721_12
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Protein Sequence
MRREFKFVGQ QEKYSVLIRD EREKEGLNME IFLDFPVVLQ NLEGAKRKFR YDCYHDSGNG 60 YQAVIQAEDL HGNCYEISDV WKQEADFIRL DRNVNCIKCV KETGIRLTTE FRCRDDKANT 120 LDDYQFIIPG ALYNKNDTDD DGVDDYLGTF SQDYKDDRNP SLSVMAFCRN SKRFISLLRG 180 DLPQKDETIT REQIRSRHFI HDTDIGSLGL APSEYHAKEI ILRCDYPFYE RSSFCLNVDG 240 SEWSAYKKIT NGVKFGMTYL LKIDKAADLT EASWKTTQLQ MDRILNPSVE LPFSLEEARY 300 YRRKMIHNSF REFPDKKGNP AGYFVHFSPR QKYGAQNLLE YGFCGQQTLL SLDMLTAAKD 360 NQDVTYRERA LKTLDYFIKN CIDDSGLPNG IYNVDKEEYV YWWTGILFPF QYSDDRKELE 420 GYLGNQIVSS LMPVAEELRK VKGNYCRSMV DTMHYLMRCY LVEKADGADH PEWLAAVVKF 480 CDKLVEIQNG NGSWNRGYTM DGIPLTNPPQ WFGKTAAEQG SGAIFPAQIL VELYRFTGEE 540 KYLASARRGA EFVYECYVKD VRYIGGLNDT THCKSVKIDA VGVMFAMRTM LLVYEQTGDI 600 KLLSGARDAA RILASWTYLW DIPFDRHTLL GQHGFKTTGW ACCDVIPGGS YVDCEFVEFV 660 PELLRIAEYC RDTELAKLAG IVTRGMHHGL SMPQNMYGYA MPGIQCEGYM TSLWLADTEY 720 KGFSGAAAKN KGDDNDTCNG LVNAQALLNL DYLSQTYGTM DFEHIIELIE KERHGDK 777
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A4Y1VDV5-F1-model_v4 | GH182 | 1 | 757 | 7 | 661 | 0.8448 |
0.9309 |
| AF-Q8A3Q5-F1-model_v4 | GH182 | 1 | 757 | 15 | 673 | 0.8415 |
0.9298 |
| AF-A0A109W1T4-F1-model_v4 | GH182 | 23 | 757 | 8 | 653 | 0.8413 |
0.9327 |
| AF-C9KR64-F1-model_v4 | GH182 | 22 | 757 | 15 | 673 | 0.8412 |
0.9286 |
| AF-A0A6H0KIQ8-F1-model_v4 | GH182 | 23 | 757 | 15 | 673 | 0.8407 |
0.928 |
| AF-A0A1C7H3C6-F1-model_v4 | GH182 | 1 | 757 | 18 | 673 | 0.84 |
0.932 |
| AF-A0A6M4MIA1-F1-model_v4 | GH182 | 10 | 757 | 7 | 663 | 0.84 |
0.923 |
| AF-A0A0P0GFT7-F1-model_v4 | GH182 | 22 | 757 | 16 | 669 | 0.839 |
0.9309 |
| AF-A0A0P0FJN3-F1-model_v4 | GH182 | 1 | 757 | 17 | 678 | 0.8389 |
0.9264 |
| AF-E6SMV6-F1-model_v4 | GH182 | 22 | 772 | 15 | 677 | 0.8384 |
0.9209 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9E8YN59 | GH182 | 9 | 757 | 11 | 661 | 0.8384 |
0.9306 |
| A0A255SPN4 | GH182 | 23 | 757 | 12 | 661 | 0.8358 |
0.9278 |
| UJH67547.1 | GH182 | 4 | 757 | 19 | 666 | 0.8291 |
0.9281 |
| A0A268K8D9 | GH182 | 1 | 765 | 1 | 673 | 0.8274 |
0.895 |
| A0A139L1L8 | GH182 | 22 | 757 | 41 | 699 | 0.8225 |
0.9262 |
| WHP16390.1 | GH182 | 7 | 764 | 1 | 673 | 0.8157 |
0.8827 |
| A0A6I6K1P7 | GH182 | 1 | 763 | 20 | 678 | 0.8 |
0.8862 |
| A0A2S0VPZ6 | GH182 | 1 | 768 | 31 | 721 | 0.7943 |
0.8672 |
| A0A1U9NH28 | GH182 | 1 | 762 | 25 | 681 | 0.7941 |
0.8844 |
| A0A7Z2ZP54 | CBM13 , CBM66 | 1 | 775 | 385 | 1146 | 0.705 |
0.8601 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5nok-assembly2.cif.gz_B | 2 | 757 | 1 | 669 | 0.5766 |
0.6319 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.