Cluster: ShaoY_2019_ERR3405779_bin.1_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3405779_bin.1
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405779_bin.1_k141_3288 | ShaoY_2019_ERR3405779_bin.1_k141_3288_56 | 63727 | 64530 | + | CE4 |
| pfam | ShaoY_2019_ERR3405779_bin.1_k141_3288 | ShaoY_2019_ERR3405779_bin.1_k141_3288_57 | 64542 | 65480 | + | NAGPA |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405779_bin.1_k141_3288 | ShaoY_2019_ERR3405779_bin.1_k141_3288_58 | 65489 | 66433 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | ShaoY_2019_ERR3405779_bin.1_k141_3288 | ShaoY_2019_ERR3405779_bin.1_k141_3288_59 | 66503 | 67675 | + | GT9 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405779_bin.1_k141_3288 | ShaoY_2019_ERR3405779_bin.1_k141_3288_60 | 67662 | 67988 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | ShaoY_2019_ERR3405779_bin.1_k141_3288 | ShaoY_2019_ERR3405779_bin.1_k141_3288_61 | 68512 | 69864 | + | 3.B.1.1.1 |
Gene ID: ShaoY_2019_ERR3405779_bin.1_k141_3288_56
Type: CAZyme
Location: 63727 - 64530 (+)
Type: CAZyme
Location: 63727 - 64530 (+)
Gene ID: ShaoY_2019_ERR3405779_bin.1_k141_3288_57
Type: pfam
Location: 64542 - 65480 (+)
Type: pfam
Location: 64542 - 65480 (+)
Gene ID: ShaoY_2019_ERR3405779_bin.1_k141_3288_58
Type:
Location: 65489 - 66433 (+)
Type:
Location: 65489 - 66433 (+)
Gene ID: ShaoY_2019_ERR3405779_bin.1_k141_3288_59
Type: CAZyme
Location: 66503 - 67675 (+)
Type: CAZyme
Location: 66503 - 67675 (+)
Gene ID: ShaoY_2019_ERR3405779_bin.1_k141_3288_60
Type:
Location: 67662 - 67988 (+)
Type:
Location: 67662 - 67988 (+)
Gene ID: ShaoY_2019_ERR3405779_bin.1_k141_3288_61
Type: TC
Location: 68512 - 69864 (+)
Type: TC
Location: 68512 - 69864 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella sp018367495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.