PROTEIN: ShaoY_2019_ERR3405779_bin.1_k141_3288_58
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Protein File & Metadata
Source:
ShaoY_2019_ERR3405779_bin.1_k141_3288_58.pdb
Genome ID:
Protein ID:
ShaoY_2019_ERR3405779_bin.1_k141_3288_58
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Protein Sequence
MKPFTRVLSA FAVGILLQGG VYLYLDQYMF APTTDFNVAG ASKDDTKNFP DVKEGTKYVS 60 YDRQFMAVVT ESSLKIYKAN ESKPTTIDLK GRSISYFSWM PDRNYAIMGL YDSREVVMAR 120 LNADDPEHEV DTKLDDLPRN SKIVDAAYSE ATNVVYMKVK VQENAYRIYR TDANYDTRRV 180 YMQATDIGHI GVFYDEDRFF YDNAKTGDIF MFNGIEGGWR VINPPGRFRL IGVDMDKTIY 240 IARVDEDNNA LTVYTGKLGV GFKPVYKYNH PTTFNELTLS DVKDVIKNGS DETTKVTEDD 300 TSSKSSSRDS KKKS 314
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K7M609-F1-model_v4 | 1 | 297 | 1 | 328 | 0.5593 |
0.6334 |
| AF-B8A4V4-F1-model_v4 | 23 | 301 | 17 | 403 | 0.5577 |
0.7408 |
| AF-Q96WW0-F1-model_v4 | 23 | 301 | 19 | 406 | 0.5391 |
0.7374 |
| AF-A0A077Z0V1-F1-model_v4 | 19 | 300 | 34 | 315 | 0.5312 |
0.6576 |
| AF-Q9P2S5-F1-model_v4 | 41 | 300 | 12 | 366 | 0.5124 |
0.7311 |
| AF-Q54WU4-F1-model_v4 | 34 | 298 | 32 | 500 | 0.5121 |
0.7569 |
| AF-Q6Z4U1-F1-model_v4 | 24 | 286 | 64 | 343 | 0.5026 |
0.6447 |
| AF-Q9M1J7-F1-model_v4 | 22 | 298 | 60 | 376 | 0.4989 |
0.6257 |
| AF-Q9M1J6-F1-model_v4 | 24 | 289 | 59 | 370 | 0.4957 |
0.6386 |
| AF-Q4V3D9-F1-model_v4 | 41 | 286 | 47 | 359 | 0.4755 |
0.6553 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T2N2-F1-model_v4 | GH39 | 35 | 287 | 8 | 255 | 0.6263 |
0.7322 |
| A0A975GAQ9 | CBM54 | 1 | 314 | 125 | 1361 | 0.4215 |
0.6976 |
| A0A518G9Z4 | CBM57 | 23 | 314 | 522 | 913 | 0.3832 |
0.702 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T2N2 | GH39 | 35 | 287 | 8 | 255 | 0.6263 |
0.7322 |
| A0A975GAQ9 | CBM54 | 1 | 314 | 125 | 1361 | 0.4215 |
0.6976 |
| A0A518G9Z4 | CBM57 | 23 | 314 | 522 | 913 | 0.3832 |
0.702 |
| CAG5111572.1 | CBM13 , GT27 | 23 | 305 | 35 | 304 | 0.3571 |
0.6637 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8g2y-assembly1.cif.gz_B | 27 | 287 | 22 | 291 | 0.5983 |
0.7107 |
| 8u26-assembly1.cif.gz_B | 23 | 287 | 50 | 322 | 0.5775 |
0.7035 |
| 5mzh-assembly1.cif.gz_A | 11 | 300 | 59 | 370 | 0.5704 |
0.7092 |
| 5mzh-assembly2.cif.gz_B | 7 | 298 | 53 | 372 | 0.5678 |
0.7046 |
| 7v9a-assembly1.cif.gz_B | 15 | 297 | 1 | 376 | 0.5513 |
0.679 |
| 7mqa-assembly1.cif.gz_SG | 3 | 297 | 6 | 389 | 0.5513 |
0.6628 |
| 4pxw-assembly2.cif.gz_B | 23 | 292 | 22 | 289 | 0.5392 |
0.6267 |
| 3soq-assembly1.cif.gz_A | 27 | 292 | 1 | 240 | 0.5304 |
0.69 |
| 6zqc-assembly1.cif.gz_CH | 7 | 295 | 11 | 463 | 0.5278 |
0.6904 |
| 7nsu-assembly1.cif.gz_E | 9 | 291 | 91 | 376 | 0.5165 |
0.6469 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O31507-F1-model_v4 | 24 | 287 | 86 | 339 | 0.5348 |
0.6907 |
| AF-Q9P2S5-F1-model_v4 | 41 | 300 | 12 | 366 | 0.5124 |
0.7311 |
| AF-Q9I609-F1-model_v4 | 23 | 284 | 129 | 484 | 0.5104 |
0.741 |
| AF-B3CP06-F1-model_v4 | 1 | 291 | 106 | 401 | 0.5079 |
0.6349 |
| AF-C0R560-F1-model_v4 | 1 | 291 | 108 | 403 | 0.5074 |
0.6357 |
| AF-Q73IV6-F1-model_v4 | 1 | 291 | 108 | 403 | 0.5065 |
0.6349 |
| AF-Q91WM3-F1-model_v4 | 24 | 295 | 155 | 467 | 0.5008 |
0.6953 |
| AF-Q9M1J7-F1-model_v4 | 22 | 298 | 60 | 376 | 0.4989 |
0.6257 |
| AF-Q9M1J6-F1-model_v4 | 24 | 289 | 59 | 370 | 0.4957 |
0.6386 |
| AF-Q7WFN4-F1-model_v4 | 1 | 290 | 99 | 421 | 0.4826 |
0.6185 |