Cluster: ShaoY_2019_ERR3405637_bin.3_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3405637_bin.3
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405637_bin.3_k141_7211 | ShaoY_2019_ERR3405637_bin.3_k141_7211_3 | 2885 | 4606 | + | GH3 |
| pfam | ShaoY_2019_ERR3405637_bin.3_k141_7211 | ShaoY_2019_ERR3405637_bin.3_k141_7211_4 | 4733 | 5695 | - | UvdE |
| STP | ShaoY_2019_ERR3405637_bin.3_k141_7211 | ShaoY_2019_ERR3405637_bin.3_k141_7211_5 | 5911 | 6873 | - | PfkB |
| CAZyme | ShaoY_2019_ERR3405637_bin.3_k141_7211 | ShaoY_2019_ERR3405637_bin.3_k141_7211_6 | 6957 | 8393 | - | GH32 |
| TC | ShaoY_2019_ERR3405637_bin.3_k141_7211 | ShaoY_2019_ERR3405637_bin.3_k141_7211_7 | 8410 | 10311 | - | 4.A.1.2.9 |
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_7211_3
Type: CAZyme
Location: 2885 - 4606 (+)
Type: CAZyme
Location: 2885 - 4606 (+)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_7211_4
Type: pfam
Location: 4733 - 5695 (-)
Type: pfam
Location: 4733 - 5695 (-)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_7211_5
Type: STP
Location: 5911 - 6873 (-)
Type: STP
Location: 5911 - 6873 (-)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_7211_6
Type: CAZyme
Location: 6957 - 8393 (-)
Type: CAZyme
Location: 6957 - 8393 (-)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_7211_7
Type: TC
Location: 8410 - 10311 (-)
Type: TC
Location: 8410 - 10311 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Intestinibacter
Species
Intestinibacter sp900540355
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.