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Cluster: ShaoY_2019_ERR3405637_bin.3_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ShaoY_2019_ERR3405637_bin.3_k141_1038 ShaoY_2019_ERR3405637_bin.3_k141_1038_1 650 2908 + GT35
TC ShaoY_2019_ERR3405637_bin.3_k141_1038 ShaoY_2019_ERR3405637_bin.3_k141_1038_2 3143 4489 + 3.A.1.1.45
TC ShaoY_2019_ERR3405637_bin.3_k141_1038 ShaoY_2019_ERR3405637_bin.3_k141_1038_3 4656 5501 + 3.A.1.1.45
TC ShaoY_2019_ERR3405637_bin.3_k141_1038 ShaoY_2019_ERR3405637_bin.3_k141_1038_4 5501 6385 + 3.A.1.1.45
CAZyme ShaoY_2019_ERR3405637_bin.3_k141_1038 ShaoY_2019_ERR3405637_bin.3_k141_1038_5 6408 7889 + GH77
TF ShaoY_2019_ERR3405637_bin.3_k141_1038 ShaoY_2019_ERR3405637_bin.3_k141_1038_6 7951 8985 + LacI
TC ShaoY_2019_ERR3405637_bin.3_k141_1038 ShaoY_2019_ERR3405637_bin.3_k141_1038_7 9024 10136 + 3.A.1.1.26
TC ShaoY_2019_ERR3405637_bin.3_k141_1038 ShaoY_2019_ERR3405637_bin.3_k141_1038_8 10208 10837 + 9.B.28.1.2
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_1038_1
Type: CAZyme
Location: 650 - 2908 (+)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_1038_2
Type: TC
Location: 3143 - 4489 (+)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_1038_3
Type: TC
Location: 4656 - 5501 (+)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_1038_4
Type: TC
Location: 5501 - 6385 (+)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_1038_5
Type: CAZyme
Location: 6408 - 7889 (+)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_1038_6
Type: TF
Location: 7951 - 8985 (+)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_1038_7
Type: TC
Location: 9024 - 10136 (+)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_1038_8
Type: TC
Location: 10208 - 10837 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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