Cluster: ShaoY_2019_ERR3405637_bin.3_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405637_bin.3
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405637_bin.3_k141_6878 | ShaoY_2019_ERR3405637_bin.3_k141_6878_46 | 41742 | 42050 | + | 4.A.3.2.8 |
| TC | ShaoY_2019_ERR3405637_bin.3_k141_6878 | ShaoY_2019_ERR3405637_bin.3_k141_6878_47 | 42257 | 43579 | + | 4.A.3.2.2 |
| CAZyme | ShaoY_2019_ERR3405637_bin.3_k141_6878 | ShaoY_2019_ERR3405637_bin.3_k141_6878_48 | 43707 | 45095 | + | GH1 |
| pfam | ShaoY_2019_ERR3405637_bin.3_k141_6878 | ShaoY_2019_ERR3405637_bin.3_k141_6878_49 | 45085 | 45984 | + | ROK |
| TC | ShaoY_2019_ERR3405637_bin.3_k141_6878 | ShaoY_2019_ERR3405637_bin.3_k141_6878_50 | 46008 | 46322 | + | 4.A.3.2.2 |
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_6878_46
Type: TC
Location: 41742 - 42050 (+)
Type: TC
Location: 41742 - 42050 (+)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_6878_47
Type: TC
Location: 42257 - 43579 (+)
Type: TC
Location: 42257 - 43579 (+)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_6878_48
Type: CAZyme
Location: 43707 - 45095 (+)
Type: CAZyme
Location: 43707 - 45095 (+)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_6878_49
Type: pfam
Location: 45085 - 45984 (+)
Type: pfam
Location: 45085 - 45984 (+)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_6878_50
Type: TC
Location: 46008 - 46322 (+)
Type: TC
Location: 46008 - 46322 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Intestinibacter
Species
Intestinibacter sp900540355
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.