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Cluster: ShaoY_2019_ERR3405637_bin.3_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3405637_bin.3_k141_3309 ShaoY_2019_ERR3405637_bin.3_k141_3309_134 147420 148676 - 1.A.1.29.3
NULL(UNKNOWN) ShaoY_2019_ERR3405637_bin.3_k141_3309 ShaoY_2019_ERR3405637_bin.3_k141_3309_135 148945 149379 + NULL(UNKNOWN)
[View Structural Homologs]
pfam ShaoY_2019_ERR3405637_bin.3_k141_3309 ShaoY_2019_ERR3405637_bin.3_k141_3309_136 149431 149745 + DUF1540 | DUF1540
TC ShaoY_2019_ERR3405637_bin.3_k141_3309 ShaoY_2019_ERR3405637_bin.3_k141_3309_137 149833 150543 - 2.A.115.2.15
pfam ShaoY_2019_ERR3405637_bin.3_k141_3309 ShaoY_2019_ERR3405637_bin.3_k141_3309_138 150632 151045 - DUF3785
CAZyme ShaoY_2019_ERR3405637_bin.3_k141_3309 ShaoY_2019_ERR3405637_bin.3_k141_3309_139 151061 152008 - GT51
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_3309_134
Type: TC
Location: 147420 - 148676 (-)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_3309_135
Type:
Location: 148945 - 149379 (+)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_3309_136
Type: pfam
Location: 149431 - 149745 (+)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_3309_137
Type: TC
Location: 149833 - 150543 (-)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_3309_138
Type: pfam
Location: 150632 - 151045 (-)
Gene ID: ShaoY_2019_ERR3405637_bin.3_k141_3309_139
Type: CAZyme
Location: 151061 - 152008 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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