Cluster: ShaoY_2019_ERR3405274_bin.1_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3405274_bin.1
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405274_bin.1_k141_446 | ShaoY_2019_ERR3405274_bin.1_k141_446_3 | 2125 | 3033 | - | 3.A.1.124.3 |
| CAZyme | ShaoY_2019_ERR3405274_bin.1_k141_446 | ShaoY_2019_ERR3405274_bin.1_k141_446_4 | 3344 | 5269 | + | CBM48 | GH13_9 |
| CAZyme | ShaoY_2019_ERR3405274_bin.1_k141_446 | ShaoY_2019_ERR3405274_bin.1_k141_446_5 | 5272 | 6726 | + | GT5 |
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_446_3
Type: TC
Location: 2125 - 3033 (-)
Type: TC
Location: 2125 - 3033 (-)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_446_4
Type: CAZyme
Location: 3344 - 5269 (+)
Type: CAZyme
Location: 3344 - 5269 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_446_5
Type: CAZyme
Location: 5272 - 6726 (+)
Type: CAZyme
Location: 5272 - 6726 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp018372555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.