dbCAN Logo

Cluster: ShaoY_2019_ERR3405274_bin.1_CGC53

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ShaoY_2019_ERR3405274_bin.1_k141_4543 ShaoY_2019_ERR3405274_bin.1_k141_4543_2 1851 3896 - GT2
CAZyme ShaoY_2019_ERR3405274_bin.1_k141_4543 ShaoY_2019_ERR3405274_bin.1_k141_4543_3 3915 6488 - CE4
pfam ShaoY_2019_ERR3405274_bin.1_k141_4543 ShaoY_2019_ERR3405274_bin.1_k141_4543_4 7181 7399 - DUF2922
pfam ShaoY_2019_ERR3405274_bin.1_k141_4543 ShaoY_2019_ERR3405274_bin.1_k141_4543_5 7460 7687 - DUF1659
CAZyme ShaoY_2019_ERR3405274_bin.1_k141_4543 ShaoY_2019_ERR3405274_bin.1_k141_4543_6 8045 9478 - GH1
TC ShaoY_2019_ERR3405274_bin.1_k141_4543 ShaoY_2019_ERR3405274_bin.1_k141_4543_7 9497 11338 - 4.A.1.2.11
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_4543_2
Type: CAZyme
Location: 1851 - 3896 (-)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_4543_3
Type: CAZyme
Location: 3915 - 6488 (-)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_4543_4
Type: pfam
Location: 7181 - 7399 (-)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_4543_5
Type: pfam
Location: 7460 - 7687 (-)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_4543_6
Type: CAZyme
Location: 8045 - 9478 (-)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_4543_7
Type: TC
Location: 9497 - 11338 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List