Cluster: ShaoY_2019_ERR3405274_bin.1_CGC49
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405274_bin.1
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405274_bin.1_k141_4388 | ShaoY_2019_ERR3405274_bin.1_k141_4388_1 | 178 | 1311 | + | GH18 |
| pfam | ShaoY_2019_ERR3405274_bin.1_k141_4388 | ShaoY_2019_ERR3405274_bin.1_k141_4388_2 | 1753 | 2436 | + | Wzz |
| TC | ShaoY_2019_ERR3405274_bin.1_k141_4388 | ShaoY_2019_ERR3405274_bin.1_k141_4388_3 | 2556 | 3209 | + | 8.A.3.1.2 |
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_4388_1
Type: CAZyme
Location: 178 - 1311 (+)
Type: CAZyme
Location: 178 - 1311 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_4388_2
Type: pfam
Location: 1753 - 2436 (+)
Type: pfam
Location: 1753 - 2436 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_4388_3
Type: TC
Location: 2556 - 3209 (+)
Type: TC
Location: 2556 - 3209 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp018372555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.