Cluster: ShaoY_2019_ERR3405274_bin.1_CGC47
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405274_bin.1
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405274_bin.1_k141_3797 | ShaoY_2019_ERR3405274_bin.1_k141_3797_4 | 3837 | 5168 | - | GH4 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405274_bin.1_k141_3797 | ShaoY_2019_ERR3405274_bin.1_k141_3797_5 | 5428 | 5604 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | ShaoY_2019_ERR3405274_bin.1_k141_3797 | ShaoY_2019_ERR3405274_bin.1_k141_3797_6 | 5620 | 7200 | - | 4.A.1.1.3 |
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_3797_4
Type: CAZyme
Location: 3837 - 5168 (-)
Type: CAZyme
Location: 3837 - 5168 (-)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_3797_5
Type:
Location: 5428 - 5604 (+)
Type:
Location: 5428 - 5604 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_3797_6
Type: TC
Location: 5620 - 7200 (-)
Type: TC
Location: 5620 - 7200 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp018372555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.