Cluster: ShaoY_2019_ERR3405274_bin.1_CGC41
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405274_bin.1
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405274_bin.1_k141_3149 | ShaoY_2019_ERR3405274_bin.1_k141_3149_6 | 10793 | 15676 | - | CBM32 | CBM32 | CBM32 | GH20 |
| pfam | ShaoY_2019_ERR3405274_bin.1_k141_3149 | ShaoY_2019_ERR3405274_bin.1_k141_3149_7 | 16421 | 17899 | - | Phg_2220_C |
| TC | ShaoY_2019_ERR3405274_bin.1_k141_3149 | ShaoY_2019_ERR3405274_bin.1_k141_3149_8 | 18282 | 18836 | + | 8.A.49.1.2 |
| pfam | ShaoY_2019_ERR3405274_bin.1_k141_3149 | ShaoY_2019_ERR3405274_bin.1_k141_3149_9 | 18860 | 19300 | + | Glyco_hydro_1 |
| pfam | ShaoY_2019_ERR3405274_bin.1_k141_3149 | ShaoY_2019_ERR3405274_bin.1_k141_3149_10 | 19315 | 19443 | + | Glyco_hydro_1 |
| TC | ShaoY_2019_ERR3405274_bin.1_k141_3149 | ShaoY_2019_ERR3405274_bin.1_k141_3149_11 | 19461 | 20261 | + | 4.A.1.2.9 |
| TC | ShaoY_2019_ERR3405274_bin.1_k141_3149 | ShaoY_2019_ERR3405274_bin.1_k141_3149_12 | 20337 | 20639 | + | 4.A.1.2.9 |
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_3149_6
Type: CAZyme
Location: 10793 - 15676 (-)
Type: CAZyme
Location: 10793 - 15676 (-)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_3149_7
Type: pfam
Location: 16421 - 17899 (-)
Type: pfam
Location: 16421 - 17899 (-)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_3149_8
Type: TC
Location: 18282 - 18836 (+)
Type: TC
Location: 18282 - 18836 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_3149_9
Type: pfam
Location: 18860 - 19300 (+)
Type: pfam
Location: 18860 - 19300 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_3149_10
Type: pfam
Location: 19315 - 19443 (+)
Type: pfam
Location: 19315 - 19443 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_3149_11
Type: TC
Location: 19461 - 20261 (+)
Type: TC
Location: 19461 - 20261 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_3149_12
Type: TC
Location: 20337 - 20639 (+)
Type: TC
Location: 20337 - 20639 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp018372555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.